1. Home
  2. Mutant Lines
  3. 11-0845-1

11-0845-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1333577 [Map]; Strand: w
      • AT1G04750.1 - [+] show detail - vesicle-associated membrane protein 721
        Distance: -10; Region: promoter
      • AT1G04750.2 - [+] show detail - vesicle-associated membrane protein 721
        Distance: -43; Region: promoter
    Flanking Genome Sequence: 11-0845-1 - 5-prime edge 
    GGTNAANCAC NGNGNCNNAN CTACAGNCTG ACTCTNNNGG CGCNGNNAAA 
    CAANNNGGGC NAGTAAGCNN CCCAGNGNNC TANATGTCAT TTAAGGTAGT 
    CAGATTGGGT CAAAAATAGT ATAAAACCTT GAATTTAAGG ACTAAAAAAA 
    AACAATTTCA AAACGGAGAG ATCAAACAAA TGTCGAGAAA GTTGGACCCG 
    CCCGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1333515 [Map]; Strand: w
      • AT1G04750.1 - [+] show detail - vesicle-associated membrane protein 721
        Distance: 0; Region: exon1 (5UTR)
      • AT1G04750.2 - [+] show detail - vesicle-associated membrane protein 721
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-0845-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    NGCTNCTNGA TCTGTCGNNT TNTNACGCNA CCNCCCAAAA AATTCTNTGA 
    TCNAACGGTC GATTGGATCG GAGATTTAAG GTAAAGAAAA AATGGCGCAA 
    CAATCGTTGA TCTACAGTTT TGTAGCTCGC GGCACAGGTG ATCCTCGTTG 
    AGTTCACTGA TTTCAAAGGT AATTTCACCT CAATCGCTGC TCAGTGCCTC 
    CAGAAGCT

AT1G04750.1

Model type
Protein coding
Short Description
vesicle-associated membrane protein 721
Curator Summary
vesicle-associated membrane protein 7B (At VAMP7B) mRNA,
Computational Description
vesicle-associated membrane protein 721 (VAMP721); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: synaptobrevin-related protein 1 (TAIR:AT2G33120.1); Has 2472 Blast hits to 2471 proteins in 261 species: Archae - 0; Bacteria - 0; Metazoa - 997; Fungi - 453; Plants - 611; Viruses - 0; Other Eukaryotes - 411 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04750.2

Model type
Protein coding
Short Description
vesicle-associated membrane protein 721
Curator Summary
vesicle-associated membrane protein 7B (At VAMP7B) mRNA,
Computational Description
vesicle-associated membrane protein 721 (VAMP721); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: synaptobrevin-related protein 1 (TAIR:AT2G33120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR