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11-0866-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12099114 [Map]; Strand: c
      • AT4G23080.1 - [+] show detail - Protein of Unknown Function (DUF239)
        Distance: 226; Region: intergenic
      • AT4G23090.2 - [+] show detail - unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bac...
        Distance: 1277; Region: intergenic
    Flanking Genome Sequence: 11-0866-1 - 5-prime edge 
    ACTATAAGCT CAACCAGAAA CAAAATTAAG TCTAAGTTCT AAAAAAATTC 
    TAAAGTACTT AACAGTGTTA TATCTAAATA AAAAAAAGTT TAGATTTTTG 
    TAAGATAAAA AAATTAGGTA ATGTGTAGTG GAATTTCCTA AAGATGATGA 
    TATAAGAAAT ACAATATTTT CTAAACTTGG AACATATAAA GAGTTCTTCT 
    TTCTTCCTCT TTCTAACCAA GTCAAACAAG TTAAATAAAA ATATATGAGG 
    ATGTTCTTTA AATTTCTCTT CAATTTCTTT TTCTATTATT TTTTTTTCAT 
    ACTAANAAAT TNATTCTCTN GCTTTCTTCN GATCATGTTC ANACNTTACA 
    ATTTTATAAT AANGGTAAGC NCTATGGAAG TTTAATTACN CTNGGGGCCT 
    CCATAAACAA TAANANGTCC TACATTTCTC CAANAATCTN GCNTATNTNT 
    NGTATCTCCC ACTTTATAAC AACCGGCNGA ATATCTCTNT GGGTTTTCCA 
    CAAAATNGTC GGCNTTATAA TTTTCGTCCC AAGTCGNAAT CAAACGGACA 
    TATGAGTCTA NTNTGGGGGG CCCCTTCGGA TAATGGCTNT TACCCTCGGA 
    GGACTTGGGG ACNAAGGGCT TGGACTTNCC NCCCNTTNNA NNNNNGNCCA 
    AACTTNNTTN NACCTNCTNG NNGGCCANAC CCNNTTTTTC CNTNNNGGCN 
    NNNCCCNTNN NNNNNNCNNN NNNGNGGNNT NGGC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12099229 [Map]; Strand: c
      • AT4G23080.1 - [+] show detail - Protein of Unknown Function (DUF239)
        Distance: 341; Region: intergenic
      • AT4G23090.2 - [+] show detail - unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bac...
        Distance: 1162; Region: intergenic
    Flanking Genome Sequence: 11-0866-1 - 3-prime edge 
    CTTATAGNCC AGNAGNCANC TTTCATTTCA CTACCCCATT ATTTGAGGTC 
    ATCTCTTACA CTGAATATGC TCAATANTCT ACATGCACAT TTAGCATGTG 
    TGTGGTTGTA ATAATGCTCA TTTTATGGGA TCAGATTTGT AAGAAAACNT 
    AACTAATAAA ACCAATGAAA TATTAAGTTT TGTGTTCNAT GAAATTGTGT 
    GATTTTGATA TTGTCTGAGT AATATAANTT TATGTGATTT TGTTGTCACT 
    AGTGATGTTA AACTAGGCCT TAAGCATGCG GGTCCAAACA TGTAATTATG 
    AAACTTCAAA CCAACAGTAA CACNTTGGTT GTAAAAACGT NNGATTTTTN 
    GNTTNAATNG ANTAAANTTC CNTATTCATT TANAANNAAA NAACTNNTNA 
    CNTTGANGAG NAAGTNTNTN CTTGGTAACT TTGGGNGGNC TGGNAACCNN 
    CNGTTTCANA AATNANATTT NGCCTGGCGN AANATNGNNN GNCCCTNGGA 
    ATAAAAAAAT CTGCCGNNAN ANNNAANNGC CGTNTTTNNT ANTNANNGNA 
    GGGTNNTCTN TATNCNAAAN ANAGGNGNNG GGGNCATNTT TTTTTNCTGC 
    CTTNGNCTNC ACCNNTGNAA AANTNANNTT TTGAAAAANN NANNNTNTNN 
    NTNNGTNAAA CTNTCATNNN ATTNGGGTTG ATNATNNNAC ACTCCNCCAN 
    GANNNTANNC NNTCCNTTNT NANTCANCNC NNCTNCCNCT CNTTCCNGGC 
    TTNTGTTANT CTNNCANANN NNTTGCNNC

AT4G23080.1

Model type
Protein coding
Short Description
Protein of Unknown Function (DUF239)
Computational Description
Protein of Unknown Function (DUF239); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT4G10220.1); Has 514 Blast hits to 504 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 514; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G23090.2

Model type
Protein coding
Computational Description
unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR