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11-0975-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9452484 [Map]; Strand: c
      • AT4G16790.1 - [+] show detail - hydroxyproline-rich glycoprotein family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0975-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGATGATGAT GAAGATGATC TTGACCTCCA TGGAATCGGA GAAGGAAGCA 
    CATCACTATT ATCATCACCA AGAGTCTTCA GAAGTTCTCT CTTAGATCTC 
    ACTTTCTCCC ATCGACCGGA ATTATCGCCG GAAGAATCAG AAACACNGAG 
    AATAATTCAA GCTCCGAACC GGCAGAAGCA GAGGCTTCTC TCTGTTTTCT 
    GAACTAACTC GATCAACGAA ACGAGTCTCA ACCTCGGGGA TTTTCATGTG 
    GTACTTGTTC TTCCATGTCT GAAACTTACG GTGATCACCG GAGGAATCAT 
    CGGACGGTTC AGATTCACTC TCGTGACCCA CGTTAAAAAC AGAGGATACT 
    TCAAGAATCT TTGGCACATA TGAATGCGAA TTGTTATTAT GATGATCAGC 
    TTTGTTGTGA TCACTATTGC TTGATCCTCC TTCGTCGTAG TTCCTGCGGC 
    TGAAGAGACC GTAAGAGACG GCGATACCGA CAAAAACAAG GTGGAGAAGC 
    TCGAGGAGTC TTGTTTGGTT AGCAAGCTCC GGCGTCTGTG AAAGGAAGAC 
    AGGTNCGACG GCGCCNANCA CCGGNGAGGA TAAGAGCTTT NANATGAATT 
    CGNGAGTNGA ATTTTNTAGG GNTTNGNTCT NCTTTATTNC CCNNNTNGGN 
    TGGGNNNTTA AGTNCCANNC NGGGCGNNNA CCANCCNGNN NCTTNAA

AT4G16790.1

Model type
Protein coding
Short Description
hydroxyproline-rich glycoprotein family protein
Computational Description
hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60380.1); Has 8255 Blast hits to 6141 proteins in 463 species: Archae - 4; Bacteria - 400; Metazoa - 3327; Fungi - 1159; Plants - 2082; Viruses - 247; Other Eukaryotes - 1036 (source: NCBI BLink).
Link
InterPro Scan - TAIR