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11-1008-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24647838 [Map]; Strand: c
      • AT1G66180.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1008-1 - 3-prime edge 
    AGTCTTCTGA TGATAGGGGC ATTTTGGGAA TGAACCGTGG TCGTCTCTCT 
    TTTGTTTCTC AAGCTAAGAT TTCGAAGTTC TCTTATTGCA TCCCTCCCAA 
    ATCAAACCGG CCCGGTTTTA CTCCAACCGG TTCGTTTTAC CTTGGTGATA 
    ACCCGAATT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24647722 [Map]; Strand: c
      • AT1G66180.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1008-1 - 5-prime edge 
    AGAAGACTCT GTAGCGCAAC CTAGTATCAA AGGAGGGGTA ATTTCGGTAT 
    TTGAGAAAGT GATTTTTTCT TTGACGAGAT TACCCTCAGC GAAGGTTCCA 
    TCAGCGTAGA AGTAAGAGTA GTGACATAAC CTGTTGGAGT CACAAGAAGT 
    AGGAAGGGTA AAATCGGGAA TT

AT1G66180.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G37540.1); Has 1897 Blast hits to 1884 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 164; Plants - 1696; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR