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11-1009-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1258484 [Map]; Strand: c
      • AT1G04580.1 - [+] show detail - aldehyde oxidase 4
        Distance: -974; Region: promoter
    Flanking Genome Sequence: 11-1009-1 - 5-prime edge 
    CTCAACATCC AACGATCTGA ACCAACTACC ATCCAAACCA ATAACATCGT 
    CTAAAACCTA CAAACTGATT GAATAAAAAG ATAAGCTAGG GAAGGTATCA 
    TAGTGGTTCG GTACNGGTTT GAATTGGTTA GATGAGATTG GACCCCTACC 
    GAAAATAGAG TCTTCGGTTA CATTTGGTTT AATAACAAGT TCATTTGAAA 
    GTTAAGAAAA TAACTAGTAT TCGAATTTAG AGATTGCGGG AGATTGTATG 
    TTCATTCGAA ATACAGTACA GAGATGCTTC GATTCCAGAT CTGCGTCCGG 
    TCTCTAATGG CCATTCGATT CTCGACCAAA GAGGGAATCT TTCGGGATGG 
    GTTGATTTGT GGGAAGTGGG AACCAAACGG AATGGGAAGA CGGAAGAGGA 
    AAGGTTTAGG AGAAATCAAT CAGACCTCCA AGGCCAAAGT CACCTTCCGA 
    TTTAGGTAAA GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1258600 [Map]; Strand: c
      • AT1G04590.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) su...
        Distance: 0; Region: exon9 (3UTR)
      • AT1G04590.2 - [+] show detail - BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) su...
        Distance: 0; Region: exon9 (3UTR)
    Flanking Genome Sequence: 11-1009-1 - 3-prime edge 
    ATGTTGAGTG TGTCGAAAAC TTCAGATGTA GATGTGATTT TGTTATCTTA 
    TTTCTCAGTA ATACTAGTGC CGCACTCAAA CCCTAAACTC TATATCCATC 
    CATTGCGACA AATCCCAAGG GATGTGAGCA TTGTCAACAA TCCATCGATT 
    AAATACATCC TTACAGTCCA TGTTTCTCTT GCAGTGATAC TTTATCGATT 
    AAATACTACA ACTTACGCTC CATGTTCGAA TTGTTTTTCA GTGGCAGCTT 
    CTGATTCTTG GTGATTATCC AGATTTTCTT TTCGCTCTTC TTGGATTTCA 
    GCTTTTGCTG CATCAACTGC GCCTTCTGTG GTTGCTTCTG GAATCCTCAG 
    TTCTGAAATC ACAAATTAGA CAGTTTAAAA CTTATCCTGT TTTGCGCAAG 
    AATCTATAGC ACATGAGTTC AATATCAAAC GGCTTTAAAG ATGGTTGAAG 
    ATATCAATGG CTAAATCGCA ATCACCTACC TGGTTTCTTC TTCTTCCTCG 
    AAGATCTACT TGGTTTATCA TCCGATGGTG TACCAAGTAA AAGATGGCTA 
    TACTTCGTCA CTACCCGTTC TTTCTCATCA AGCATTCCCA AAAGCTCATA 
    AGCATCAGCC ACGGTCTGCA CAATGTGCTT GTCCGGANGC TTACNGGCAT 
    AACTCTCCAN ATCCTTGAAT AGCTTCATAA CCCACATAAC AAACAAACAC 
    AAGTTTGAGG TCACCACGAA ATAAAGTAAC TTACTAGTCA GTTAAGTNTC 
    AATGGGCAAN GT

AT1G04580.1

Model type
Protein coding
Short Description
aldehyde oxidase 4
Curator Summary
Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.
Computational Description
aldehyde oxidase 4 (AO4); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: abscisic aldehyde oxidase 3 (TAIR:AT2G27150.2); Has 17858 Blast hits to 17128 proteins in 1274 species: Archae - 410; Bacteria - 10596; Metazoa - 1017; Fungi - 119; Plants - 281; Viruses - 0; Other Eukaryotes - 5435 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04590.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21190.1); Has 111 Blast hits to 111 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04590.2

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4); Has 111 Blast hits to 111 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR