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11-1029-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18966929 [Map]; Strand: w
      • AT2G46170.1 - [+] show detail - Reticulon family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 11-1029-1 - 5-prime edge 
    AAAAACAGTA TGTGGTTTTC GATGAAAAGG TTCTCTCTAA GATTCCCATT 
    GCTTCTCTCA AGGCAAAGGC AAAATTGGGT TAAAAAGAGA GACAGACGTC 
    TATGGTTTTC TTTTTGCATT TTTGATCATG TGAAATTGGT GGTCACTTGC 
    AGGGTTTTGC CGCTAATGGC CCAACTGTCC TTTTTATGAT TTTATCACGT 
    TTTGAGTACA CTTGTTTTTT CTTTTCAAAT ACCATTTTTT CCAGCTTTTT 
    ATGGAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18966854 [Map]; Strand: w
      • AT2G46170.1 - [+] show detail - Reticulon family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 11-1029-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTG 
    CAACTCCTTC ATTGCTTTCT CTGCCAATGG ATCAACCTTG TCCTCGTGTT 
    TCTCATACAA CATTGGGACT GTGTGCAATA TCACGAAGCA AATGTACACC 
    AAAGTCAGGA AATTGAACCA ATTGCCCACC ACCGAGATGA TCCATAGACC 
    GACAACAACC TGACATAACA AATCTCATCA TCAGATTCAG GACAATGAGT 
    TTACTTGAAG GGTCTTAATG GGCTATGACA TACTGTAACT TGACACACTG 
    TTGCTAGAAG ATACTTACGA TATTATGTTT TGTATAAGTG ATACATTCAC 
    GGTTCAACAG AGAAAGGTTG AAATGTAACT AATTTCCGAT ACACAAACTT 
    AATCATTTCC TAAACTGTTT AACTAAACAC AGCAAACGTC AGCAACAAAG 
    AATGAGCATA CCATCAGGAA TTTTTTTAGG TCCCTTCCTA AAGCAATGCT 
    TCGTAGGATA ACAAAAGCT

AT2G46170.1

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; INVOLVED IN: response to karrikin; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G61560.1); Has 1230 Blast hits to 1228 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 708; Fungi - 7; Plants - 492; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
Link
InterPro Scan - TAIR