Home
Mutant Lines
11-1060-1

11-1060-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 5; Position: 423109 [Map]; Strand: c
- AT5G02140.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: -275; Region: promoter

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCNT GNNGNNCATG AAAGNNACCA NNCCGGNCCG 
NCANNCANGC AGTGCCCATA TATATGTCTC TCAAACGTTT ATTATTGGAT 
AAAGATTAAC ACTCATAGAT TTCTTCATCA TTGCATTTCT TTAAGGCAAA 
TTTGTTTATA CNTTTACAAT CCATAACTAA TTTTCAGACC TAGCTAAAAT 
CTCATTGTCT AACATTTTAA TTATTCTTAG AAATTGATTT GATATTTTTG 
AATATAGTTT TATAATTTTT GTAATAATGT CGTAATGTTA CCACCTGAAT 
T

3 prime edge [+] show sequence

Chromosome: 5; Position: 26376637 [Map]; Strand: w
- AT5G65930.1 - [+] show detail - kinesin-like calmodulin-binding protein (ZWICHEL)
  Distance: -117; Region: promoter
- AT5G65930.2 - [+] show detail - kinesin-like calmodulin-binding protein (ZWICHEL)
  Distance: -117; Region: promoter
- AT5G65930.3 - [+] show detail - kinesin-like calmodulin-binding protein (ZWICHEL)
  Distance: -190; Region: promoter
- AT5G65940.1 - [+] show detail - beta-hydroxyisobutyryl-CoA hydrolase 1
  Distance: 0; Region: exon14 (3UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTACCATG 
GCAAACGGAC GTGGAAGCAC GTCTATAGTC ATTGTTCATT TATTTGATTG 
AGATTCCTCC TTGGTCTCAT CTTCTGAAAA CGAAAAATAA TTAGAAAATC 
AGGTGAATCG TGAAGTATTG AATGAGAAGA GGCAATTAAA AATCTCCCGT 
GACTCTCGTC TCCCCATCTC TCTCTCTCCC TCTGCCCAAA TTTCTGGGGC 
AAATNTGTTC ATCAGATCTA CTACAATCTC TCTTTTTCTT CGGGTATGGA 
GGGCCAACGA GGCAGTAATT CTTCGTTGAG CTCTGGCAAT GGCACCGAAG 
TCGCCACCGA CGTTTCTTCT TGCTTCTATG TTCCCAATCC CTCTGGAACC 
GATTTCGATG CCGAGTCGTC TTCTCTTCCT CCTCTGTAAG TCTTCTTTGA 
ATTTTTAAAA ACATTCACTC TCTTGCTGCT GTCTCTGTTG ATCCTTCTTC 
TTTGAAAATT TGAAAACATT CTTAGTCTCT CGCTCTGTCA CAGCTCCCCA 
GCTCCTCAAG TGGCATTGTC AATTCCTGCG GAGCTTGCCG CCGCCATTCC 
CCTCATCGAT CGCTTCCAGG TTGAAGCT

AT5G02140.1

Model type: Protein coding
Short Description: Pathogenesis-related thaumatin superfamily protein
Computational Description: Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G18250.2); Has 1588 Blast hits to 1558 proteins in 178 species: Archae - 0; Bacteria - 37; Metazoa - 56; Fungi - 96; Plants - 1388; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G65930.1

Model type: Protein coding
Short Description: kinesin-like calmodulin-binding protein (ZWICHEL)
Curator Summary: encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches.
Computational Description: ZWICHEL (ZWI); FUNCTIONS IN: microtubule motor activity, calmodulin binding; INVOLVED IN: trichome branching, pollen germination; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FERM central domain (InterPro:IPR019748), Prismane-like (InterPro:IPR011254), MyTH4 domain (InterPro:IPR000857), Kinesin, motor domain (InterPro:IPR001752), FERM, N-terminal (InterPro:IPR018979), Band 4.1 domain (InterPro:IPR019749), Kinesin, motor region, conserved site (InterPro:IPR019821), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), FERM domain (InterPro:IPR000299); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.1); Has 92234 Blast hits to 53602 proteins in 2354 species: Archae - 1118; Bacteria - 10667; Metazoa - 44581; Fungi - 7061; Plants - 5079; Viruses - 192; Other Eukaryotes - 23536 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G65930.2

Model type: Protein coding
Short Description: kinesin-like calmodulin-binding protein (ZWICHEL)
Curator Summary: encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches.
Computational Description: ZWICHEL (ZWI); FUNCTIONS IN: microtubule motor activity, calmodulin binding; INVOLVED IN: trichome branching, pollen germination; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FERM central domain (InterPro:IPR019748), Prismane-like (InterPro:IPR011254), MyTH4 domain (InterPro:IPR000857), Kinesin, motor domain (InterPro:IPR001752), FERM, N-terminal (InterPro:IPR018979), Band 4.1 domain (InterPro:IPR019749), Kinesin, motor region, conserved site (InterPro:IPR019821), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), FERM domain (InterPro:IPR000299); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.1); Has 92267 Blast hits to 53660 proteins in 2386 species: Archae - 1115; Bacteria - 10663; Metazoa - 44616; Fungi - 7060; Plants - 5081; Viruses - 192; Other Eukaryotes - 23540 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G65930.3

Model type: Protein coding
Short Description: kinesin-like calmodulin-binding protein (ZWICHEL)
Curator Summary: encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches.
Computational Description: ZWICHEL (ZWI); CONTAINS InterPro DOMAIN/s: FERM central domain (InterPro:IPR019748), Prismane-like (InterPro:IPR011254), MyTH4 domain (InterPro:IPR000857), Kinesin, motor domain (InterPro:IPR001752), Band 4.1 domain (InterPro:IPR019749), FERM, N-terminal (InterPro:IPR018979), Kinesin, motor region, conserved site (InterPro:IPR019821), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), FERM domain (InterPro:IPR000299); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2).
Link: InterPro Scan - TAIR

AT5G65940.1

Model type: Protein coding
Short Description: beta-hydroxyisobutyryl-CoA hydrolase 1
Curator Summary: hydrolyzes beta-hydroxyisobutyryl-CoA
Computational Description: beta-hydroxyisobutyryl-CoA hydrolase 1 (CHY1); CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT2G30660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR