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11-1126-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9316116 [Map]; Strand: c
      • AT4G16540.1 - [+] show detail - Heat shock protein HSP20/alpha crystallin family
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 11-1126-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    GCGACGTCAC CAGAGTAGAA ACGGCCACTT GAGTCATGGC TCAGAGCAGG 
    AGCTTCACCA GTCACCTTGA CTCGCCCATT CGTGACAGAG ACAGTGAAGT 
    TTTCTTTGGG AACACCAGGC ATGTCTGCAC GCACNGAATA GTTTGCCGTT 
    TGGGAGCTGC TTCGACTCAT AGGCCATAGT CGATTGTGGG AACGCAAGTA 
    CAAATACTCT CATTTTAAAC ACCCAATCTC AGTACTAAAT ATAATTACTA 
    GGACAAGAGA GTTGTACAGG AGAATACCAT TTGGATCGGT GCCACGGAGA 
    TC

AT4G16540.1

Model type
Protein coding
Short Description
Heat shock protein HSP20/alpha crystallin family
Computational Description
Heat shock protein HSP20/alpha crystallin family; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), Small heat shock protein, predicted, plant (InterPro:IPR016952), Peptidase A1 (InterPro:IPR001461), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: Heat shock protein HSP20/alpha crystallin family (TAIR:AT2G03020.2); Has 121 Blast hits to 97 proteins in 24 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR