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11-1142-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7217816 [Map]; Strand: w
      • AT2G16650.1 - [+] show detail - proteinaceous RNase P 2
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-1142-1 - 5-prime edge 
    CTTATCCCCG AACTAACCAT ACGATCAAAA ATCTCGAAAC CACGGTCAAT 
    GGCAAGGTAT TGAAGAGATA TGTCAGTAAT GGAAGCTGAG CATAGGTACA 
    GAAGCGTTTG AAAATGTTGC TGGCCTGAGA CGTACTTCAC TGGAAGTGAT 
    GGCCTGCATC ATAAAGTGCT AATGCAGCTG AGAGGTCCTT GGACTTGGAG 
    CATGAATTGA GATTGAAGAG GAGATTTGTT TCTGGGTTTC TGCTTACCTT 
    CTTCTTCTTG TTGGGTCTTG AAGAGCTCTC GTCGTGACGG CGAGACCGGT 
    GTTGATCAGA AGCAGCCATG TATACCTCAA AGTTACAAGC T

AT2G16650.1

Model type
Protein coding
Short Description
proteinaceous RNase P 2
Computational Description
proteinaceous RNase P 2 (PRORP2); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: nucleus; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribonuclease Zc3h12a-like (InterPro:IPR021869), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: proteinaceous RNase P 3 (TAIR:AT4G21900.1); Has 397 Blast hits to 377 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 82; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Link
InterPro Scan - TAIR