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11-1145-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27743747 [Map]; Strand: w
      • AT1G73780.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: -125; Region: promoter
      • AT1G73790.1 - [+] show detail - Protein of unknown function (DUF3743)
        Distance: -925; Region: promoter
    Flanking Genome Sequence: 11-1145-1 - 5-prime edge 
    CTGGGATAAA ACTNACAAAA TCGGTNATAC GATAACGGTC GGTACGGGAT 
    TTTCCCATCC TACTTTCATC CACTGAACTC TCGTTTGAGT AACGTGACTC 
    ACTCAAAGAC ATTGNCTTCT ATAAATAGAA CGGAGAGAAA CCCACTTTAA 
    ACTCCAAACC AAATATCTTC TTNTTCTTTC TATAACGTTA GTGAGACAAT 
    GAAGGGTTCT TGCACAAAAC CAGTGTTTTT CACGTTGTAC AATCCTTCTC 
    ATTTTAATTG TTGCCCAAGA AAACAGAGTC GCTGCAGTAG ATCCATGTAA 
    TCCTGCGCAG CTGAGTCCAT GCTTGGAGAC CATAATGAAA GGGTCTGAGC 
    CATNGGATCT GTGTTGCANC AAGGNGGAGG ANCAACAGCA TTGNATCTGC 
    CAGNTACTTG AAGAACCCTA ACTTNTAATT TTTCCTTAAC TCCCCAAACG 
    CCAAANTAAT ATGCCACTGN TTGGCACTTG TCCGTATACG AAATGCTAGG 
    TNCTNNTATN TNGNNCTAAN NNTNNGANGT ATACTGGTAN CTGGCNTGTT 
    CGAAGANCNA AAAAAGGNGA CGNTCGTTCC CNNTGNGCTT CNCTAAANGN 
    ACNGGNTTNN NCTAGCTNNA CANCGNTTAN TNAGNTATTT GACGGTGGNG 
    NGTTNNANNT NNGAGGNCGT NNNGCNGGNN NANGAAATNA NTGATGNCGT 
    NGNCANGAGT NNTTNGCGAN GNACTANTNG ANNNNAAGGA ANTGCNACGC 
    NCNTANNNNN CNNTAGCNNN CATCNTANCN NANCATTNGN CGNATCGNNG 
    CAGTAANTTG TCNGGNNACG NNGNNCNNNN NNAGGN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27743694 [Map]; Strand: w
      • AT1G73780.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: -178; Region: promoter
      • AT1G73790.1 - [+] show detail - Protein of unknown function (DUF3743)
        Distance: -978; Region: promoter
    Flanking Genome Sequence: 11-1145-1 - 3-prime edge 
    GTTGCAGGAG ATCTCGATAT GTCTAAAAGA GATTAACTTT TTTCTAAAAG 
    GCTCGGACAA

AT1G73780.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G18280.1); Has 273 Blast hits to 272 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G73790.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3743)
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3743 (InterPro:IPR022214); BEST Arabidopsis thaliana protein match is: AtGCP3 interacting protein 1 (TAIR:AT4G09550.1); Has 218 Blast hits to 218 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 58; Plants - 72; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).
Link
InterPro Scan - TAIR