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11-1159-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8799195 [Map]; Strand: c
      • AT2G20390.1 - [+] show detail - unknown protein; Has 50 Blast hits to 50 proteins in 18 species: Archae - 0; ...
        Distance: -977; Region: promoter
      • AT2G20400.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-1159-1 - 5-prime edge 
    GNTGACNNAN CNNGGTCNTA GNACNGGATN AATCTATATG CTACTGNANC 
    ACNTTNGCGN NTGTCGNTTA CCCTNCTTAN CGNANANACN ATGGTGGNNT 
    CTGGNGTTAA AAGAGATGAT NAGTCATCAT TCTNTCCCGN GAGTAGAANA 
    GGCGCNGTGC AAATGCCANT AATTTTNNTA CNGTGGAATG TTCNGAATGG 
    NTAACAAATN NNNNATGCTG GGGCTTTTTN AAATANNCCN NAAATGNNTT 
    TTNACTNNCT AGNTNATNCT TTTTNTTNNA NATANANAGN GGGNNNNACN 
    CANNNNANNA GNAANGACNN NANANTATAN CGGATANAAN NNNGNGNNNA 
    GANNGGANAA NAAAAAAANC GANNNTAACC ANNNCGCCNN AGAAATAGAT 
    AAACAANNNG AAANANANAC NNNTNNNTNG ANTNANGGNA ANNGANAATN 
    NGNTANTTCN NTNATNNNGN NNNANGGGNN ATGNANNNNN CNCGANCNNA 
    AGNGNCCNNG NNNNNNANNN TAATCCNGNA NNANGCNNNN NGAAAANNCG 
    NAAAATNNCA NNTTANANNN NNAANNAANA ATANNNCNNN GANGGTANAN 
    ANGTCCCGAA NNTATAGNAN AANNNNNGNG NANANNTANN NGAGANTAGA 
    NNGANNGTAT NGTAGNANCN ANTANANNGT ANNGNAGANA AAATGNNTNT 
    ACTNNTNTNN CNANNNNNTN ACNNANNANT ATGNGGNANN GANANGNANG 
    NNANNAGGGA GNGGN

AT2G20390.1

Model type
Protein coding
Computational Description
unknown protein; Has 50 Blast hits to 50 proteins in 18 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G20400.1

Model type
Protein coding
Short Description
myb-like HTH transcriptional regulator family protein
Computational Description
myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: phosphate starvation response 1 (TAIR:AT4G28610.1); Has 1676 Blast hits to 1665 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1651; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR