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11-1163-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1333184 [Map]; Strand: c
      • AT2G04039.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloro...
        Distance: -78; Region: promoter
      • AT2G04039.3 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloro...
        Distance: -78; Region: promoter
      • AT2G04039.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloro...
        Distance: -87; Region: promoter
    Flanking Genome Sequence: 11-1163-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTTATAGTT ATGTTTACTA TCGTATGTAA ACTTTAGTAA 
    TAATATGTTT ACGTTGATCT TCCCATTGTA GAAGCACAAG AATAGAAGAA 
    AGAAAGAGTT AAGTGTCGTT AGCTTAATTG GTAAGACTCT AGGCAAAACT 
    AATATTACNG GATTTCGGCC CAGAACCAAA AAAAAAAAAA GNTTTNAAAA 
    AAAAAAAAAA AANNGNNNNN AANNAAAANC CGGGGCCAAA NNGNCCTTTT 
    TNAANCCTTN CAAAAAAANN NAANNNTTTT TGGAAANTNN AAANNANCCC 
    CCCCNAAAAA ATTTNNNNGN AAANNTTTNA NNGNCCCCCG GGGGGGAAAA 
    AAAAANNCCN AANNNNCCNG GGGNTTTNNC CNAANTTNAA NCCCGGGGGN 
    AAAATTTNGN NNNTTTTNAA CNNNCCNTTN NANNGNCCAA AAAAANNNAA 
    GNTTGGGGGG GAAACNGGAA AANCNNNNTT TTNAAGNNAN CCCNTTNANN 
    NTTTTATNCC NNAAAAAAAA AAAAAAGGGG AANGGGGGTT TTTTNGGGGN 
    NGGGAAACTG GGGNAAANCC CCTNTNANNA ANTTTTTGGA AAAGNGGNTT 
    NAAANGNCCC CTNTNNAAAA AAAAAANCCC NCCCGGGNNT NAAAACCAAA 
    AATTCNCNNG TTNGNGGGGG NAAAAAAAAN CCCTTTGGGC NAAAAAGGGG 
    GNNCCNTTA

AT2G04039.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G04039.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 157 Blast hits to 157 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G04039.3

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR