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11-1172-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3235056 [Map]; Strand: c
      • AT3G10405.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: polle...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1172-1 - 5-prime edge 
    CAAGGAGCAA TGTCGATTTC TTCGTTGGGG TCTGCAATCT CAAAGCCAAC 
    TTCTTCATCA TCTTCATATA CGTACTTAGG AAGCTCTTCT CGCATCTTTG 
    GGCTAGTTAC GTCTTCTTTG TTATGGACAA AGAGTAAATC TCACCACACA 
    AACACAAAGC TCAAGAAGCA AAAGCTATGT GTTAGAAATT CAGCTCAAGA 
    GATTCCAAAG ACACTTGAGG AAGATTCCAA GTTTGTACCT TTAGATCCTC 
    AAGATCCTCG ATTCGGCCCT CCAGTCAGTT TATTTGTCCC TTTCAACTTT 
    GTATACTGTT GAGTGTTGAT AGATAGTCTG TGATGATGAC AAACACTTTG 
    ATTCAATCTT TTTTTGCAGG TTTTGCTGTT GCTTGGCCTT CAACTTCATG 
    AAGCACAAAA GGTGATATAT ACATTAGATG GATATCAAAC TTCCAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3235130 [Map]; Strand: c
      • AT3G10405.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: polle...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-1172-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TCTCCTAATC TCATCTCTAT CTTGCTTGTT AGATAAAATC GTTCATGTAG 
    CCAATCATGT TTTGCCATGT GTCATGTACA TAAACCGCAT CAAAACCTGT 
    TCATTACTCT TGCAAGCCTA CCTCGGCTTT ATTTTGTATA AACAACGTTT 
    TAAGTTTTGT TTTATACATT TCGTTATTTC GGAAACAAAC ATAGATAACA 
    CATTTCGTAG TAATTATTAT GTTTTTGGTG TCAGCAGAGT TTGATTTTAT 
    AACGAAATTG GGCAACCCCT ACATATACTT GTATCTTTCT TATGACTTAT 
    GAGATCAAAT TACAGAAGAA AACGTCAATT GCTCACACAT TGTTTTATGT 
    TTGCTGCCTT TTGTTTTCAT GCAACGCAAA AGAAGATGTG ATCACATCTG 
    AGCAACCAGT TCCTCTCCTC CCTGAGCAGC AACAGTCACA GTAGCATCTT 
    CGATAAGTGA ATT

AT3G10405.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: chloroplast; Has 44 Blast hits to 44 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR