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11-1194-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 674426 [Map]; Strand: c
      • AT5G02900.1 - [+] show detail - cytochrome P450, family 96, subfamily A, polypeptide 13
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1194-1 - 3-prime edge 
    TTGAAAACNG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTA 
    CTCTAGTGAT GCTCAACCAT CAAGGGTTTC AAAGTTTGTC AATGAGTACC 
    ACGAGAAGTA AGCTCAAGGA TGGGCTTGTG CCTCTTTTCA ATCATTTTGC 
    AGAGAATGGA ACAGGTGGTG GACTTGCAAG ATGTGTTCAA AAGGTTTATG 
    TTTGATACGA CTCTAGTGAC AGTAACCGAT TCTGCTGATC CTAGATCTCT 
    CTCCATTGAA ATGCCAGAGG TTGAGTTCGC TAAAGCTCTC GATCATGTAG 
    GAGAAGGGAT TATGCATANA CATGTTAGAC CGAGACTCTT GTGGAAGTCC 
    GCAAAAATGT GNTGGATTTN GACAAGAGAA AAAGTTTTCA AAAGCTGACG 
    CCACTTTAAA TCAGGCGTGG GCANAGGTAC GTCTTNNGAN TNCNANAGNT 
    NANNCCTNNA TCNCCNATGT TTNNGNTTAT TCAGNCNAAN CGNGNNNCNA 
    NNGACCNACC NTTNCNCTNT NGNNGACGNC NNNNGNNNGA CCGGCNNGAN 
    NNANCTNACN TACNAATCGN TGACCCGCNA ATANCGTTAN NTTCNTNAAN 
    GNCCNGNNCN NTTTNNANTN NNANTAATCT ANANTNTCNA AANNNNNNNA 
    ACCNNCNGNN NNTGACNNAN AGNNGNNTAT NNCNNNANNG CNNNNCTCTN 
    ATTAACNTNC AATNNATNAN CNTNANNNNC NTTAATCNAT NAAAGANNTN 
    NNNCCTANTN AAGTAGNTNT GAGCANTTNN TNNACCNCNT AGCNANNCGN 
    NNGTGANNAN G

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 674422 [Map]; Strand: c
      • AT5G02900.1 - [+] show detail - cytochrome P450, family 96, subfamily A, polypeptide 13
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1194-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATAGAG AAGCTATCTT CAGATTCTTC CATAACTCTG 
    AACCGTCTGT TGTGAGTATC CCATCTCCAA AAACATCAAA CACTTGTTTG 
    AAATCGGGAC CTTTGGTGTA ATTGGAGAAG TTTGAGCTCA TTATATGATG 
    AATATTAGTT GGATCAACAG TGAACAACAT ATCCATACCA GTGAACCATG 
    GGCCTTTAAA TGGAAATGTC AAGTCAGAGT TCTCGAGAAC CTCCACGCTG 
    AAGTCATAGA TCCGATGGAA CTCCAAGAGC AGACCCGGAA GCATCCCGAG 
    AACCGGCCAG TTCCCAAGGA AGAAGTGAAG GATGATAAAG CAAAAGATGG 
    CTATGGAAGC T

AT5G02900.1

Model type
Protein coding
Short Description
cytochrome P450, family 96, subfamily A, polypeptide 13
Curator Summary
member of CYP96A
Computational Description
"cytochrome P450, family 96, subfamily A, polypeptide 13" (CYP96A13); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 12 (TAIR:AT4G39510.1); Has 27924 Blast hits to 27854 proteins in 1456 species: Archae - 45; Bacteria - 2340; Metazoa - 10567; Fungi - 6003; Plants - 7899; Viruses - 3; Other Eukaryotes - 1067 (source: NCBI BLink).
Link
InterPro Scan - TAIR