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11-1197-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4660994 [Map]; Strand: c
      • AT1G13607.1 - [+] show detail - Defensin-like (DEFL) family protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G13608.1 - [+] show detail - Defensin-like (DEFL) family protein
        Distance: -688; Region: promoter
    Flanking Genome Sequence: 11-1197-1 - 5-prime edge 
    TTTGCAATTG CGATAAGAAC AATGCCTACA TGCAATGTGG TTTGAACAAT 
    CCAGGTCAAT TTTACATTTG TATTCTCTGG ATTTGGATAT AGTGTCCATA 
    TTAGGTTCAT CCAAAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4661110 [Map]; Strand: c
      • AT1G13607.1 - [+] show detail - Defensin-like (DEFL) family protein
        Distance: 0; Region: exon2 (3UTR)
      • AT1G13608.1 - [+] show detail - Defensin-like (DEFL) family protein
        Distance: -572; Region: promoter
    Flanking Genome Sequence: 11-1197-1 - 3-prime edge 
    ATTGCAAATG CGATCATGGA ACCTGTAAAT GCATGCCATG ACTCTTAACC 
    CACAAGGCCA CAAGCCATTG ATCCAACTGC ATCTTCAACT CGTCTTAATC 
    TCTCCTATAT ATGTACTCTT TTGTTTGTAA TGCAAAAGAA AATAAAACAT 
    AATATTTTCA GTTGATAAAC TACTAATGAA ATATTATACG TCAACGAAAT 
    TTAGTATATA AACTACAAAA CGGCAAAAAT AGCTTTCTCG AAACCAACAA 
    AGTTAATTGG ACAAACGACA AAAAAACTCA CAAAAGCCAT AGATAGATTT 
    TCAATTAACC ACGTAACCGA CACTTTCTTC TTTTGGGATA AATCTATTTT 
    TTTTTTAAAG CCATANATTN TTAGGACACC TTATTTTAAN GAATTATNTA 
    AATTNAATNG GACNTTACAA ACGTAACATA TNCTTACATA TGCGTTATTT 
    AATGAAAACA TTGACAAAAG TAAATNNTTT TAGGCAACNA AACTTTNTGG 
    ACCCCAAAAN GCTNTANATN TNTACCTATT ATNGNANGNC TTCNAATATT 
    ATTACATCGC AAACTAAGCT TTAGTTNTTC NGACCTCAAA TTNNTAAAAA 
    CGAAATNGGG TTAAGAANCT NGGAAAAANT GAACAATTNT TNNGGCTAAC 
    CATTGGNNGG TTTTTNGGGN GGNTNTTGGT TTANCTGGNA ACTNAACNTT 
    NGNNCTAGGT TTTTTTTN

AT1G13607.1

Model type
Protein coding
Short Description
Defensin-like (DEFL) family protein
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Computational Description
Defensin-like (DEFL) family protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Defensin-like (DEFL) family protein (TAIR:AT1G13609.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G13608.1

Model type
Protein coding
Short Description
Defensin-like (DEFL) family protein
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Computational Description
Defensin-like (DEFL) family protein; BEST Arabidopsis thaliana protein match is: Defensin-like (DEFL) family protein (TAIR:AT1G13609.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR