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11-1200-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 6089275 [Map]; Strand: w
      • AT2G14365.1 - [+] show detail - low-molecular-weight cysteine-rich 84
        Distance: 462; Region: intergenic
      • AT2G14370.1 - [+] show detail - transposable element gene
        Distance: -5831; Region: intergenic
    Flanking Genome Sequence: 11-1200-1 - 5-prime edge
    TCCTTGAGTA TTGGTTAAAC CCAATAAAAT TATTATTTTT TGTTAGCACT 
    CACCATTTAA TGAGGATC
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 6088995 [Map]; Strand: w
      • AT2G14365.1 - [+] show detail - low-molecular-weight cysteine-rich 84
        Distance: 182; Region: intergenic
      • AT2G14370.1 - [+] show detail - transposable element gene
        Distance: -6111; Region: intergenic
    Flanking Genome Sequence: 11-1200-1 - 3-prime edge
    CTCAAGGATA CGGTGTTACG TCTATTCAGC TATCAATCTC TTGTGAGAAA 
    GTTGATCTAA AACAAGAACA TTTAGTGTTC GGTTACCATT TATGCGTTGT
    GCAAGACAAC TTATGAGTTA TACAGTACCT CTTTATCTAA ATGGAAGCAA
    AATTTGCAAA TATCTTACTA TACCCACTTA TCCCTATGAT AATGGGGAGC
    TTTTGTAAAA TTATTAAAAC TTTCTAAGCT

AT2G14365.1

Model type
Protein coding
Short Description
low-molecular-weight cysteine-rich 84
Curator Summary
Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.
Computational Description
low-molecular-weight cysteine-rich 84 (LCR84); LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Cysteine-rich protein (TAIR:AT2G22345.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G14370.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 1.2e-116 P-value blast match to GB:AAD22153 polyprotein (Gypsy_Ty3-element) (Sorghum bicolor)
Link
InterPro Scan - TAIR