1. Home
  2. Mutant Lines
  3. 11-1281-1

11-1281-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 201182 [Map]; Strand: c
      • AT3G01510.1 - [+] show detail - like SEX4 1
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-1281-1 - 5-prime edge 
    ATGGTAGGAG ATACACTCAA GAAGGCTAGT GATTCTTCTG GTGGTACTCT 
    TGTGGAAATC AAGGATTTTG GTGATACCAA GTAAGAATTG TACAGTACCT 
    AGGCTTCTAT ATAACCTTGT TAATGTTGTT AACTAAACAT TGCTTGGTGA 
    CTAGTTAACA TGGGAAGATT TAGCATGGAA ACACTTTGCA TATCAGTGTT 
    TTTGAAATTT TCTTTTTTAT TTCTTCCAGT TTTTGATTTA TTCAGGAAGA 
    TGCCTGGTAG AGAAAACTGG ATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 201298 [Map]; Strand: c
      • AT3G01510.1 - [+] show detail - like SEX4 1
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-1281-1 - 3-prime edge 
    CCTACCATGA TGATTCTCGC CTTCTCCGCA TTGCTCTACA AACAAACAAA 
    AAAGTTAATA ACTTTTCAAA ACTCCTGAGA TTACTACTAC TTCCACATGA 
    CATTCTAAGG ATCGGAGAAT ACCCCTTTTT TGATGGCGTG GACGAAGATC 
    TTGCCATCTG CTGAAAGTGC GAAGCGAATC CCGAGGGGCT TCTCGAGAGT 
    GACCATATAC TCATTCAAAT TCATTTTGAA CGGAGTAGAA GAAGACGACA 
    TCGCAACAAC TCTAAGAACG ACTCTTCTTC GTCTGTTGAA TCCGAACTTT 
    TCCCTCGAAC CCAAGTACGC AATTCCTCTT CCGTCGAATA CACGGCCATT 
    ACCGCTCCGG AATGAAGATC CGATTATAAT TGACGGACAA GATCGTTCGA 
    GAGCTCCTAA ACCGGAGATT TGTTGAAGAA ACGCCATTAA ACCGATCCAA 
    TAGAGATTTT TCCGAGAATG TGTGTGTATG GAAGAAGTTG GAACTGTGAG 
    CAGAAAACGA GGCGGCAGAG GAAGGTAAGA AAGAAATTAG TGGTCCACGT 
    GTCTTCACGT AGGTCCCGCT TTCTCGTGGA AGTATCTAAT TTCCTTTTTA 
    TCAACACATG ACACGTGTCT TTTCCTCTCA GTGAGAAAAA AAAAAANGGA 
    AANNAAAATN TCAAAGGTTC NTTTNGANTC ACCCTTNGAN TGGGCTTCN

AT3G01510.1

Model type
Protein coding
Short Description
like SEX4 1
Curator Summary
Encodes a putative phosphatase, LSF1, required for normal starch turnover in leaves.
Computational Description
like SEX4 1 (LSF1); FUNCTIONS IN: protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: starch catabolic process; LOCATED IN: starch grain, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), PDZ/DHR/GLGF (InterPro:IPR001478), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase (DsPTP1) family protein (TAIR:AT3G52180.1); Has 834 Blast hits to 834 proteins in 152 species: Archae - 0; Bacteria - 14; Metazoa - 310; Fungi - 61; Plants - 322; Viruses - 12; Other Eukaryotes - 115 (source: NCBI BLink).
Link
InterPro Scan - TAIR