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11-1301-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19689058 [Map]; Strand: c
      • AT2G48150.1 - [+] show detail - glutathione peroxidase 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1301-1 - 5-prime edge 
    CTGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCGAGANA TNCGTCCATC NNTTCACTGN AAAGGTNTTC TCTTTTCGCT 
    CATACTANAG GANGAGGTTG CATCGGCCGC TGTGATATTT GTTTATTCCT 
    TATCGTTGTT GTTGCTGTTG TTTCCTGGGA ATTAGGATAG CTCCGGCAAG 
    GACCTGAATA TGAGCATTTA CCAAGGGAAA GTCCTCCTCA TCGTCAATGT 
    TGCTTCCAAA TGGTTCGTCT CTTTTGTTCT TTTGCTATTT TCTTATTCAC 
    CTCTAATCCT TAGTTTTGTG CGCAAACAGC GGTTTCACCG AAACAAACTA 
    TACACAGCTC ACCGAACTTT ACCGGAAATA CAAGGACCAA GGTCATTGAT 
    TATATTACGG CCTTTTTTGT TATGCAGTTG CAAGCTCATC TCCTTTGTTG 
    GTTTTACCAT TTCATGCTCT CTCGTTTTCA GATTTTGAGA TCTTGGCATT 
    CCCTTGCAAC CAGTTTCTAT ACCAGGAGCC CGGCACAAGT CAAGAGGCTC 
    ATGAATTTGC CTGCGAACGC TTTAAGGCCG AATACCCTGT TTTCCAAAAG 
    GTACGTAGGG ATCAAGACTC TTGGAACAAG TTTATTATCT TATTATGTTA 
    GGCTGCTGTG ACTTGTGGTA TGTTCGTTTA TAACAAGAAA TTCATAAACA 
    TGCACTTAAC AAGTCTTGAT TTGNTGAATG TTGGGTAGGT ACNCGTA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19689174 [Map]; Strand: c
      • AT2G48150.1 - [+] show detail - glutathione peroxidase 4
        Distance: -1; Region: promoter
    Flanking Genome Sequence: 11-1301-1 - 3-prime edge 
    TTGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAC 
    CTTTTATTTA AGGAACCCTC TTTGACCCTT TTTAAAGGGA AAGACTTCCT 
    CCTTGTTTTT CTAGTCTTCT CTCCTTTTTA CTTCATTCTT ACATAAATGT 
    GAAATTGCAT TATTGCCTTA TTATAGAAAA AAAATGAAAG TATTCTCAAC 
    AATCTCTCTC TCTCTCTCTC TCTAGTNTGT ACTATATTCA AGANAAAAGT 
    CCCTATCATT CCATTTCAAA AAAGAAAAAN CCAACTTTTT AGTGGGAATA 
    TTATTATAAG AGATGAATAT ACTGATATAC ATCATACACT TCAGGGTCAA 
    AACCCACATA ACAAAATAGT GTTGACACAA AAAAAAAANC NNNGNNTANN 
    CAGGGGGGGG CNTNNAAATC CNACCNCGNT CTCNANAAGG GGCTTTTTTT 
    TTTTAANCCN TCCCCCCANA ATGGGNTNGG GGGGGGNTNN NGACCCCAAA 
    TCNNGNNNGC CCCCNCCCCC TTTTTTATNA NANNNCTTTT TCCCCCCAAN 
    NANNANACCC NGTTTTTTTT TNAAATANCN NNNNGGGGCN GNNNACCNNN 
    NGTGCCCTTN NANGANNTNN ANNTANCNNN GNCGGGAAGG GNNTGNNGTG 
    NNNNCNNNCA NNCANNCANG CTGCNNCTCN NCCGNCGNNN GNGGNNGGGA 
    GNGNNNGTCG CNNNCANGNN GGCGGNGNNN AGTGANNNGN NCGGGNCGAA 
    NGNGANNCAG CAN

AT2G48150.1

Model type
Protein coding
Short Description
glutathione peroxidase 4
Curator Summary
Encodes glutathione peroxidase.
Computational Description
glutathione peroxidase 4 (GPX4); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress, N-terminal protein myristoylation; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 5 (TAIR:AT3G63080.1); Has 7346 Blast hits to 7345 proteins in 1724 species: Archae - 2; Bacteria - 3554; Metazoa - 785; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2404 (source: NCBI BLink).
Link
InterPro Scan - TAIR