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Mutant Lines
11-1318-1

11-1318-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 5220692 [Map]; Strand: c
- AT1G15165.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: -579; Region: promoter
- AT1G15170.1 - [+] show detail - MATE efflux family protein
  Distance: 0; Region: exon1 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATGGC 
ATGGGAGACG CAGAGAGCAC TAAGGATCGC TTGCTGCTGC CGGTAGAGAG 
AGTCGAGAAC GTGACATGGA GCGATCTGCG AGATGGTTCA TTCACCGTAG 
AACTCAAAAG GCTTATCTTC TTCGCCGCTC CTATGGCTGC TGTTGTTATC 
GCTCAGTTCA TGTTACAAAT CGTTTCAATG ATGATGGTTG GTCACCTCGG 
CAATCTCTCC CTCGCTAGCG CCTCTCTCGC CTCCTCCTTC TGCAACGTCA 
CTGGCTTCAG CTTCATCGTC TGTTTTCTCT TCCTTCTTTC CCCTAAATTG 
ATACACTTAT CTCTGTTATT TTGATGATTG TTACTTTTTG CCTGTGGTGT 
TAGATAGGAT TGTCATGTGC CTTAGATACT TTGAGTGGTC AAGCT

5 prime edge [+] show sequence

Chromosome: 1; Position: 5220607 [Map]; Strand: c
- AT1G15165.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: -494; Region: promoter
- AT1G15170.1 - [+] show detail - MATE efflux family protein
  Distance: -34; Region: promoter

GANTGATCNA CACANANTGT NNANNAGNTA NTNNTGATGA NNCGNNNGGG 
AAAGGGTNAN NCAAANGCGG TGAGNGATAT TNGTGATTTG TGCCTGCATG 
TCCTCCTTCG ACGAATCTTC CCAAACCCCG TAAATGAAAT AATATTAAAC 
TTTGGCTTAG ATTTCAATGA AATATTCTTT ATTTNAAAAA TGCAAATTTG 
TTTGGGATCT CGGCTTTTGC TGCTATGAAT NTGNATTTTG ACCTTTATAT 
CATCCACACT NTTTTTCAAT CTATNAGTCA TTCTATTGAA TGGACGAAAG 
GTAGTNCGTT ATAAAATACT ACTATATGGA TGCTAAGCTG GTNAANATTC 
TTGGAATTTT GCNANNAAAA ATATCTAAAT NGNTTGNCCC NTTCTCCAAA 
GGCTGCTTCT GNNTANNGTN TCNNTCTANT TATNCTCGGT NNCANTTANN 
NNAGNGGTNT GNAANNNGAA NGNTNANAAT GNTATCCCTG ATCGTCCNAC 
GGNGTNAGAA NNTGNTGANC GGTNTCTNGA NNNGNNNGCA TGANAACNAA 
AATNAANGCG NNACANNNNN NACCTNANNT NTNATNANNC NTCNNCGGTT 
NNNTNAANNC CCATNTTTTT NNNCNNNNGT NNNTNGNANN NTTATNNAAN 
NNNTAANNCN GANNTAATTA NAGTATAATN TNCAACTCNA NAN

AT1G15165.1

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G67530.2); Has 427 Blast hits to 408 proteins in 25 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G15170.1

Model type: Protein coding
Short Description: MATE efflux family protein
Computational Description: MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15180.1); Has 8903 Blast hits to 8835 proteins in 2013 species: Archae - 124; Bacteria - 6072; Metazoa - 149; Fungi - 330; Plants - 1330; Viruses - 0; Other Eukaryotes - 898 (source: NCBI BLink).
Link: InterPro Scan - TAIR