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11-1344-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 10221189 [Map]; Strand: c
      • AT3G27590.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-1344-1 - 5-prime edge 
    GGTCACGGCA ACGCGCCCCA CGTACAGNCT CCCNCTNCGN GCGNNGANCA 
    ACAGCCGGGG CCGACGACCA CGGCTGTGCG GCTATAGAGA NNCGTATNNG 
    TGATGNATCA GAGGNTNCCT CTAGTAGGTN ANTTNNATNA TACCTTTCTA 
    CANTATGTNA ACTNAATTTT TAAGTGTAAT TAATTACTAA TCACTATTCA 
    GTTTTTGTTT TGTTAACATG ATTTCTCGTT TTTTTTTTTN GNGAAAAAAT 
    TTTAAAATNA ATNCNCGAAA AAGGGNTAAA NNAAGGGNGN NTTTTNAAAA 
    AGAAAAATAA NTTTTTTTTA AAAAAAAAAA AAAAAANGCN NAGTTTTTAA 
    AGTTTTAAAA AATTNNTTNT ANGGGGTAAA NGTNCCANCC TTTNNAAATN 
    AAAAAANNGG GGGNNNNAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 10221292 [Map]; Strand: c
      • AT3G27590.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 11-1344-1 - 3-prime edge 
    CCGTGANCNG GCCNGGCGGA TGNGAGNCTG GGCCNGANCC CACGNCNTNC 
    TNNANNGAAC TAGTCTAACC CAAACCATGT CACAATCGTT GCATGTTGAT 
    GTTTGATTAA TAAACTTTTT ACTAAACCAA ACGATGAAGT TTATTTGGAA 
    AATTGTTTGG TATATAAGAG CACAGAAAAT TACTTTTGAA TGTTTAAAAT 
    CTTTGGGAAT CAACTCCAAC ACAAACCAAA GTAAAACCAA ACAAACTAAA 
    ACCTAATACG GCGTTGATCA TCAAATTAGC CTTTCAAGCC TCAGTCTATC 
    TTGTGTGGAA GGAGCGGAAC CAAAGAATT

AT3G27590.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05095.1); Has 18 Blast hits to 18 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR