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11-1345-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5270918 [Map]; Strand: c
      • AT3G15570.1 - [+] show detail - Phototropic-responsive NPH3 family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-1345-1 - 5-prime edge 
    CCTAGCCATG CTCGTACTAC AGAGGATGGC TTGTACCGAG CCATTGATAC 
    ATATCTCAAG GTATAAATAA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5271034 [Map]; Strand: c
      • AT3G15570.1 - [+] show detail - Phototropic-responsive NPH3 family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1345-1 - 3-prime edge 
    TGGCTAGGAA GAGCTGTGAT TAAGGAAATA AACTCCGGTA AAGCTAAACC 
    ACCGTCAACG GCAGCTTCAG CGAGGTAGGA GTCAACAAGC T

AT3G15570.1

Model type
Protein coding
Short Description
Phototropic-responsive NPH3 family protein
Computational Description
Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G52770.1); Has 825 Blast hits to 823 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 824; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR