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11-1371-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 113779 [Map]; Strand: c
      • AT1G01280.1 - [+] show detail - cytochrome P450, family 703, subfamily A, polypeptide 2
        Distance: 0; Region: exon2 (CDS)
      • AT1G01290.1 - [+] show detail - cofactor of nitrate reductase and xanthine dehydrogenase 3
        Distance: -507; Region: promoter
      • AT1G01290.2 - [+] show detail - cofactor of nitrate reductase and xanthine dehydrogenase 3
        Distance: -507; Region: promoter
    Flanking Genome Sequence: 11-1371-1 - 5-prime edge
    GCCTTAGGCA TAGTCATGCC ATAAACTTCC ACCGTATCAA TATTTCCCGG 
    TGAAGACCAT TCAAAGCAAT GGAAGAGCCG AGCCAAAGCC ATTAGCACCA
    TCGTCACACC TAACGGAGCT CCGGGACATT TCCTCTTGCC GGCACTAAAC
    GGCAATATCT TAAAATCCGG TCCATGACTT ATCTCAACGC GTCCGCTACC
    TTCAACGGGC CAGTGTCGTT CTGGCCTGAA GTCTTCCACG TCGTCCCATA
    TCTTAGTGTT TCGGCCCAAT CCATGTGTAT TGATGAAGAC ACGTGTCTTT
    GCCGGGATGT AGTAGCCGTT GATCGTTGTT GCTCGGACGG ATTCGTGAGG
    GATCAAGAAT GGTCCGGCTG GATGCATTCG GAACGTCTCT CGTACCACAC
    AACGTAGATA GTTTAAATGG ACTAGATCCG ATTCGTCGAC CATTCGATTT
    GATCCTACGA CATTATCGAG TTCTTCTTGA ATTTTACGCA TCACTCGCGG
    TTGCTTGATC GCTTCAGCCA TTGCCCATTC GTTTGTGACT GCTGACGTAT
    CTGTCGCAGC AGCTATCATG TCCTATTCAA ATTTACAACG AATACATTAT
    TTTGTCAAAT ATTTTTTGAT GCATTTATTA TGAACGTAAC GCGAATTTAT
    AATACCTGAA TTANAGCTTT AATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 113895 [Map]; Strand: c
      • AT1G01280.1 - [+] show detail - cytochrome P450, family 703, subfamily A, polypeptide 2
        Distance: 0; Region: exon2 (CDS)
      • AT1G01290.1 - [+] show detail - cofactor of nitrate reductase and xanthine dehydrogenase 3
        Distance: -391; Region: promoter
      • AT1G01290.2 - [+] show detail - cofactor of nitrate reductase and xanthine dehydrogenase 3
        Distance: -391; Region: promoter
    Flanking Genome Sequence: 11-1371-1 - 3-prime edge
    CCTAAGGCTA AACCATTACG GGCAATCGCT AAGCCACGAT TGGCAGCTCA 
    TTTGTACACA TAACTTTGGT TTAAATTGAA TAATAAAAGC ATCTACATTG
    GACATATTAA TGGGGTGTCT TCTACCATAA TAAAATATTA AGAAAATTAA
    AATATGACAA TGTCTTTAAA CTAGAGACAT TCAATGAAAA TGTCTATGAG
    AAGACATTAT AGTGAAGTAG ATTTTCTATT TAAAGACAAC CTCATATTTT
    AATAATTATA TTTTAGTTTT TTTTAATAAT TTCTTACGTG GGAAGACATC
    CAATATAATT GTGCAATGTG GATGGCCTAA GAATT

AT1G01280.1

Model type
Protein coding
Short Description
cytochrome P450, family 703, subfamily A, polypeptide 2
Curator Summary
member of CYP703A CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis).
Computational Description
"cytochrome P450, family 703, subfamily A, polypeptide 2" (CYP703A2); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: medium-chain fatty acid metabolic process, pollen wall assembly, medium-chain fatty acid biosynthetic process, sporopollenin biosynthetic process, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G07990.1); Has 29652 Blast hits to 29399 proteins in 1569 species: Archae - 44; Bacteria - 2451; Metazoa - 11172; Fungi - 6019; Plants - 9091; Viruses - 3; Other Eukaryotes - 872 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01290.1

Model type
Protein coding
Short Description
cofactor of nitrate reductase and xanthine dehydrogenase 3
Curator Summary
COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli MoaC. Expression is low in all tissues examined, except in roots. Appears to have targeting signals for chloroplast or mitochondria
Computational Description
cofactor of nitrate reductase and xanthine dehydrogenase 3 (CNX3); CONTAINS InterPro DOMAIN/s: Molybdopterin cofactor biosynthesis C (MoaC) domain (InterPro:IPR002820); Has 5242 Blast hits to 5240 proteins in 1916 species: Archae - 213; Bacteria - 3669; Metazoa - 104; Fungi - 75; Plants - 45; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01290.2

Model type
Protein coding
Short Description
cofactor of nitrate reductase and xanthine dehydrogenase 3
Curator Summary
COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli MoaC. Expression is low in all tissues examined, except in roots. Appears to have targeting signals for chloroplast or mitochondria
Computational Description
cofactor of nitrate reductase and xanthine dehydrogenase 3 (CNX3); CONTAINS InterPro DOMAIN/s: Molybdopterin cofactor biosynthesis C (MoaC) domain (InterPro:IPR002820); Has 5242 Blast hits to 5240 proteins in 1916 species: Archae - 213; Bacteria - 3669; Metazoa - 104; Fungi - 75; Plants - 45; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink).
Link
InterPro Scan - TAIR