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Mutant Lines
11-1383-1

11-1383-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 3941090 [Map]; Strand: w
- AT5G12190.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: 0; Region: exon1 (CDS)

GTTAAAGGGA AGGTTACGAA CGTAGAGCAC GCGATTCACC TCCGGTGGGA 
GTCTGGTGTT ACTCTTGCGA AGACTGATTG TTGTCATAGC TTCTCTTCTT 
CTTCTTTTCC TTCCTTTATT AGCCGGTGAT TTGTTATCGC CGCCGTGAAA 
AAAGTTCTTC TATCGGAAAA TGAAAGTTAA TAGTTCTGAT TACGATTGAT 
GCGATGCGAG TATTTATAGG GTGGAAGAAT TAAAGGGTAT AATCGTCTTT 
CCGAATGCAG GCTTGGGGGA TTTTGATTGA CGATTTTATG TAAACCATTA 
AAACCAAAAG TAATTTACCA AACCGATATC TATTTCTGGT TTGATGGCAA 
AAACCTGAAC GCCTTTCAGT GTTGATCAAC CTACTAAAAA AGCAGCCTTA 
TATACCTGTG CGGCCTCCAG CTCAAAAGCT

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 3940974 [Map]; Strand: w
  - AT5G12190.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 11-1383-1 - 3-prime edge
```
CCTTTAACAT AACGAGCGAA GAGATGTACG ATATCTTCGG CAAGTACGGC 
GCAATTCGCC AGATTCGAAT CGGTTGCGAC AAGGCGACGA AAGGTACTGC 
CTTCGTCGTT TACGAGGATA TCTACGATGC CAAGAAC
```

AT5G12190.1

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G14870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR