Home
Mutant Lines
11-1397-1

11-1397-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 27959513 [Map]; Strand: c
- AT1G74370.1 - [+] show detail - RING/U-box superfamily protein
  Distance: -147; Region: promoter
- AT1G74380.1 - [+] show detail - xyloglucan xylosyltransferase 5
  Distance: -65; Region: promoter

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCG ACAACTACTA TTTTACTTTA ACCGATTTCG 
GTAATAGAAA ATTACGGAAC TAAACCGGTA GTTTAATTTT GGCGGTATAG 
TGAAACGATG CGTTTTGGTA GTTAAACCTG AAAACAGAAA CNGGATAAGG 
TGAGGAAATC NGGTGGGGGC NGGCGGAAAC ATTGAAAGGC GTTTCAGAGT 
CACCATGTTT TACGACGCGT GTCTCTTTTT CAGCCGGTTT TCTTCTCGCT 
GGTTACATCA GAGCTTCGGC GATATTATAT AACTCAACGA CGTAGCNTGT 
TGCATTTTTT GTTTTTGCAA TGATCTTCAT CTTCATGACC GGATAAACTC 
TTGTAAGTGT ATTTCGTTTT CTGTAATTCT GTTAATGATT TCTTGGGTTT 
CATCAAGTTC GTTACTTTTT GTATGTTCTC GGTCCAATCT TTGGGGGTTG 
GATTGTAAAT CTCATATCTG ATTATGTAGT GTATGTGTGT GTGATTTTCT 
TGTTGCAGAG AGAAAGATTC AAAGTGATTA TCTTTGTGGA TC

3 prime edge [+] show sequence

Chromosome: 1; Position: 27959562 [Map]; Strand: c
- AT1G74370.1 - [+] show detail - RING/U-box superfamily protein
  Distance: -196; Region: promoter
- AT1G74380.1 - [+] show detail - xyloglucan xylosyltransferase 5
  Distance: -16; Region: promoter

GTTGTCGGTG AGAGTGAGCT GTACGCGTTT CTTCTTCTCC TTGTGCGCTT 
TCTGGATCGA ACGAAGCATT TTCCTCCGAC AATATATTTT TAAGTAATGA 
CAATGTTTCC GCATTATTGG GTTTAATTCC ATTTTTAAAT TAGGGTTCTT 
CAGATCGACA AATCTTTCTC TTTCTCTTTC CCCGATCGGA ATCATGCTAG 
AGATCTGAAC TTTTTCTCAG ATCCGTGAAT AAGTAAGTAC AGAGAGAAAG 
AAACATACTC AGACTGATCT GAGGAAAACA AAGTTGATGG TCGCAAACCT 
GTAAGTGAAA TCTATAGAGA GAGAGAGACG TTGGAGGAGA AAATGGGTCA 
AGATGGTTCG CCGGCGCATA AAAGACCTTC CGGAAGCGGC GGAGGACTTC 
CGACGACGAC GTTAACCAAC GGTGGAGGAA GAGGTGGTCG TGGTGGTTTG 
TTACCTCGAG GTAGACAGAT GCAGAAGACG TTTAACAACA TCAAGATCAC 
AATTCTCTGT GGTTTCGTCA CAATTCTCGT CTTACGTGGC ACTATCGGTG 
TTGGTAACCT AGGAAGCTCA AGCGCCGATG CAGTTAACCA GAACATCATT 
GAGGAGACTA ACCGGATTCT AGCTGAGATC CGATCTGATT CGGATC

AT1G74370.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G29270.2); Has 323 Blast hits to 323 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 171; Fungi - 2; Plants - 134; Viruses - 3; Other Eukaryotes - 13 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G74380.1

Model type: Protein coding
Short Description: xyloglucan xylosyltransferase 5
Computational Description: xyloglucan xylosyltransferase 5 (XXT5); FUNCTIONS IN: xyloglucan 6-xylosyltransferase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: N-terminal protein myristoylation, root hair elongation; LOCATED IN: Golgi apparatus, Golgi membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: Galactosyl transferase GMA12/MNN10 family protein (TAIR:AT5G07720.1); Has 459 Blast hits to 457 proteins in 98 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 150; Plants - 280; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link: InterPro Scan - TAIR