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11-1399-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3543617 [Map]; Strand: c
      • AT1G10680.1 - [+] show detail - P-glycoprotein 10
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1399-1 - 5-prime edge 
    NGGATAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCAA TCAGGAGTAC ATATCTCATA CATATCTTAT 
    ATATACGAAA AGTGATATCT GATCTCATCT CATGTATGTT GTGTTTCTTA 
    CACCATTATG AATACTATCT GGCTTTTGTA TATTCGTAGT ATTTTTTAGA 
    AAACTTTAAA TTATTAGGGT TTGTTCATAA TCTTCCATCT GAGTGAATAT 
    GAAATTGTTA ATTGTATATT TTTATATGTC TAAGAATCGC AGTGAGTAGT 
    AAGATTTTGA ACTTGGCCAT TAGAATTTAC ATGAAGATTC ACATATCTAA 
    AGAGGTTGAG ATTTGATAAA TCAAATTTTT CCTAAAAACT AAAGTTATCA 
    TATTCTTGGG TTCAATGTTA TATGAGATAT ATCAATTAAA TTTCCAAAAG 
    CGAGGTCAAA ATGCTAATTA ATTCATGCAT ATTCTGAAAT ACATCTTTAC 
    TAATGTTGAC TCCAAATAAA AAATGAAATG AAAAGGTAAG AAATAATAAG 
    TTTTATTCTC TGAAATTGAC CGGAAACAAA AAGTTTTATT CTCTGCTCGG 
    CTTATTATTT TATTTATTTT TGGATGTGCA GTACTCGTTG GATTTTGTAT 
    ATCTGAGTGT GGNGATACTC TTTTCATCAT GGTTAGGTAA ATCACATANC 
    AAAGAGAACA ATCAATTATA TTTTTTTTGA ANAAATGATC AAATTTTTAA

AT1G10680.1

Model type
Protein coding
Short Description
P-glycoprotein 10
Computational Description
P-glycoprotein 10 (PGP10); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 2 (TAIR:AT4G25960.1); Has 851951 Blast hits to 394154 proteins in 4179 species: Archae - 14690; Bacteria - 665527; Metazoa - 18433; Fungi - 12853; Plants - 9433; Viruses - 32; Other Eukaryotes - 130983 (source: NCBI BLink).
Link
InterPro Scan - TAIR