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11-1403-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9778300 [Map]; Strand: c
      • AT2G22970.1 - [+] show detail - serine carboxypeptidase-like 11
        Distance: 0; Region: exon14 (3UTR)
      • AT2G22970.3 - [+] show detail - serine carboxypeptidase-like 11
        Distance: 0; Region: exon14 (3UTR)
      • AT2G22980.1 - [+] show detail - serine carboxypeptidase-like 13
        Distance: -577; Region: promoter
      • AT2G22980.2 - [+] show detail - serine carboxypeptidase-like 13
        Distance: -577; Region: promoter
      • AT2G22980.3 - [+] show detail - serine carboxypeptidase-like 13
        Distance: -577; Region: promoter
      • AT2G22980.4 - [+] show detail - serine carboxypeptidase-like 13
        Distance: -577; Region: promoter
    Flanking Genome Sequence: 11-1403-1 - 5-prime edge
    NTCCCAAGCA TGTCCAACTA GTGGGGAGAA AGTNNTAAAA CTCCTCCGGA 
    GGANCAANTC ACGTTACACA GTCGATAATT GTAATGTATA CAAAGCAGTC
    TATGATACAT ATTCTTATTT TTTATAATTA AAAGATCATG AGCCTTTTTA
    CAAAGGTTGG CCATTAATCC ACCTTTGAAA CATGTTAAAA GTCTCTTGTG
    GTCGATTCTC TGCTGTGTGT CCACCTCCCT ATAATTTAAA CGCTCAAAAA
    CAATTAGAAA ATACTTTTGA TATAATGAAA TGGCTAATAA AAATTTTAAA
    TTGAAACAAG AAGACTTGCT TTGACAGTAG CAAATGTCAT CTTATTGGAA
    TAAGTTCTCG TGTATCTGTC AAGAAAAAAA AAGGCATGAA TGATAAGATG
    AGAAAATGAA TGANCAAGAA AAACAAAAAA AGTAAAATAT ATTATATATA
    CCCAGCGATT NGATCTTTAA TCATCCAAGG TCTCCATTCA TCAATGATAG
    AGTAATTTAG AGATCTTATC CAGGCTTGCG TTGCGAGGAA AGGAACCCAC
    CAAATCATGA TCACCACTGT TCACCATCAA CCGCGCAAAA ATGATCATCT
    CTTAAANTTT GNAGGNAGGA ATGGACCNCT ATGGGTTAAG CTNTATGGGT
    TCAGGTTAGA TTTTTTTCNA NAATNGGNTN TGACAGTAAC TNAANCAAAT
    AAAT

AT2G22970.1

Model type
Protein coding
Short Description
serine carboxypeptidase-like 11
Computational Description
serine carboxypeptidase-like 11 (SCPL11); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 12 (TAIR:AT2G22920.2); Has 3892 Blast hits to 3798 proteins in 426 species: Archae - 0; Bacteria - 404; Metazoa - 645; Fungi - 842; Plants - 1574; Viruses - 0; Other Eukaryotes - 427 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G22970.3

Model type
Protein coding
Short Description
serine carboxypeptidase-like 11
Computational Description
serine carboxypeptidase-like 11 (SCPL11); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 12 (TAIR:AT2G22920.2); Has 3900 Blast hits to 3815 proteins in 421 species: Archae - 0; Bacteria - 404; Metazoa - 629; Fungi - 816; Plants - 1557; Viruses - 0; Other Eukaryotes - 494 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G22980.1

Model type
Protein coding
Short Description
serine carboxypeptidase-like 13
Computational Description
serine carboxypeptidase-like 13 (SCPL13); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 11 (TAIR:AT2G22970.1); Has 4004 Blast hits to 3927 proteins in 473 species: Archae - 0; Bacteria - 512; Metazoa - 640; Fungi - 845; Plants - 1555; Viruses - 0; Other Eukaryotes - 452 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G22980.2

Model type
Protein coding
Short Description
serine carboxypeptidase-like 13
Computational Description
serine carboxypeptidase-like 13 (SCPL13); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 11 (TAIR:AT2G22970.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G22980.3

Model type
Protein coding
Short Description
serine carboxypeptidase-like 13
Computational Description
serine carboxypeptidase-like 13 (SCPL13); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 11 (TAIR:AT2G22970.1); Has 3923 Blast hits to 3846 proteins in 444 species: Archae - 0; Bacteria - 407; Metazoa - 639; Fungi - 820; Plants - 1542; Viruses - 0; Other Eukaryotes - 515 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G22980.4

Model type
Protein coding
Short Description
serine carboxypeptidase-like 13
Computational Description
serine carboxypeptidase-like 13 (SCPL13); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 11 (TAIR:AT2G22970.3); Has 4003 Blast hits to 3936 proteins in 468 species: Archae - 0; Bacteria - 512; Metazoa - 625; Fungi - 814; Plants - 1533; Viruses - 0; Other Eukaryotes - 519 (source: NCBI BLink).
Link
InterPro Scan - TAIR