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11-1406-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19078944 [Map]; Strand: w
      • AT2G46480.1 - [+] show detail - galacturonosyltransferase 2
        Distance: -558; Region: promoter
      • AT2G46490.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -462; Region: promoter
    Flanking Genome Sequence: 11-1406-1 - 5-prime edge 
    GGGATAAACN AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA GNGAGGNNNC TGNACGCTAG ATCTTCGNTG 
    GATTCTCCTN GCCATCGNAN ACTTCNAACC CTAATCGAAT CTAAGAGACG 
    ANCGCCNAAN TCAGTANCTC TCTCTCTCTC TCTCCAAGAN GCNATTTNTA 
    TGCTNTTCTC TGATCTGTAT TNTTNNNANA NCTCTCTNGC TAAAGGGGCC 
    CACGANNAAC AGACTNTTAT TGGTGTAANN NNGGTTATAN ACNNTTATAT 
    GNGCAGCGGA NATNCNCAAC GNNGCNGTTN TGGGCTCNNT AGCATAAAGA 
    CNCNGACGGT GTCGTTTATC CCGANGGCNN ANAGAGAGAT NTAACGCGTC 
    GANNAAATAA TNGNCANNNG CCANCTAACG CCGTCGGANN ANGCCTTANG 
    GGGCTTGNNC NCCATAGAGC CGAGAGCTAT TNACACNNAA NTATCNGGNN 
    TTANATAGTA AAATCGNGTC CACCGAAAGA TTCAGATCCT TATTCTTCTC 
    CACCGGATCT CGAAATCGGA NAATTACCCA AACGATGGCC GGNGGCGGAA 
    TATTCCGCAA CATCNTGGNG GGTTGTGTCT GCGGGCTTGA TTCCGCCATC 
    GAGCGGNGGG GTTACCACAA AAGCGGGGGG ATGTGCNGNT TCACGATAAA 
    TGNAGNGGNG CNGGGAAAAA NCAAAATCAG CGACGGNCGG CGTCTTGTCC 
    CCGCCCCGGA AGCTCAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19078967 [Map]; Strand: w
      • AT2G46480.1 - [+] show detail - galacturonosyltransferase 2
        Distance: -581; Region: promoter
      • AT2G46490.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -439; Region: promoter
    Flanking Genome Sequence: 11-1406-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    ACAATGTGTG ACATCAGTGG TTTTGGGGTT TCTCTTATCT CTCGTTTACT 
    CCACCCTCAT GATCGGCTAC AGACTTCACA AGCGTTCACT GTTTGGTTCG 
    TTCTTTACCA ACCATTAATG GATTCTTTTT CTTTAGTTCT TGGAAGATGT 
    ACNTTATTTC TGTAAATCAT TTCAGAGAAA TACAACATCA GGAATAACTT 
    CATCAACAAG GTAACGTTAT CAACTTAAGA TCATCATATT GTACCTGAAA 
    GAATTGAAAG AAATTGACGC TCTGAAATGG TTGTTTATTC AGGATCTTAA 
    CTGGAGAGAA CGTGAAGCTC TGGAATCTAT TCCATCTCTT TTCACAAAAG 
    AGGTCCTTGG TGTTCTCTGT TTTGCTGCTT TCGTTCTTCC GATCCTTTCT 
    TGGTACAAGT AACTTACTAG CGTTTGAAAC AGGTCCTTGA TGTTCTCAAT 
    GTCACCACCT CCAGTGACAA TCCTTTGAGC GTTGATTCAC TCAGGAAGAA 
    TCATTCAGTG GCTAACACTG TTCAAACTTC TTCTGAGGTA GATAGATACT 
    TATGGTTCTT CTCTACTTTC TTGACCTGTA CGAAATGACT GATGCTTGTT 
    GTTTGAAGGG AAACGANGAC AAAATGGTTC CTCGTTTTGG TCATGGAACC 
    TGGATAGGAA AAGCATTTAA TGATACACCA NANATGTTGC ATGAAAGGGT 
    ACTTTTAATC TTTCT

AT2G46480.1

Model type
Protein coding
Short Description
galacturonosyltransferase 2
Curator Summary
Encodes a protein with putative galacturonosyltransferase activity.
Computational Description
galacturonosyltransferase 2 (GAUT2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 1 (TAIR:AT3G61130.1); Has 1463 Blast hits to 1447 proteins in 223 species: Archae - 0; Bacteria - 480; Metazoa - 145; Fungi - 0; Plants - 824; Viruses - 2; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G46490.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR