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11-1411-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3370182 [Map]; Strand: w
      • AT5G10660.1 - [+] show detail - calmodulin-binding protein-related
        Distance: -336; Region: promoter
      • AT5G10660.2 - [+] show detail - calmodulin-binding protein-related
        Distance: -336; Region: promoter
    Flanking Genome Sequence: 11-1411-1 - 5-prime edge 
    AAGATAGACT AGCTCAAACA AAAGTCTACA GGTTTTCCAA AACGATTTAC 
    TTATAAATTT GGGTATTATT TTGTTTAGGA ACAAATAAAT AAATCGAGGA 
    TC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3370118 [Map]; Strand: w
      • AT5G10660.1 - [+] show detail - calmodulin-binding protein-related
        Distance: -400; Region: promoter
      • AT5G10660.2 - [+] show detail - calmodulin-binding protein-related
        Distance: -400; Region: promoter
    Flanking Genome Sequence: 11-1411-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TGTCTATCTT TGTATTAAAG TATATGTCTT ACCACGTAAT TTCTATTACA 
    TAGATATACA TGTCTAAATT TATTTATCAT TATTTTTATT TCCTTATATA 
    AAGAATAACT AATTGTATTT TTTTAATGCT TTACATTCAA TGGAAAAATA 
    TATTCTTCCT AATTTAGTTT TGAATTAAAT AACAATTCAA TTGTTTTTAG 
    CTTTTACCAA TCCACACATT AAATTGAAAG ACTACTCTGT GATTTGTTGC 
    CTAAAAAGAG AAGTAACGAT TTCATTTATT TATTTGTTTG TTGATTATTA 
    ACAATAAGAT GATATATTAG ATGTCATAAA AAAGTGTATG TATAAAACAA 
    CTGGCTATTG GAATTTAAAA CATAAAAAAA GTCAAAGATG GGAAATCCAA 
    ATCGAGTGAT GCATCGATAT GTGGCTATAC TCAAATATAT ATAGGGTTCT 
    AAACCAAACG TTCATACCAT TTGTAAAACT GATGGCTCTA GCAAGAGAGT 
    CTTGGGTGGA GAATT

AT5G10660.1

Model type
Protein coding
Short Description
calmodulin-binding protein-related
Computational Description
calmodulin-binding protein-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10660.2

Model type
Protein coding
Short Description
calmodulin-binding protein-related
Computational Description
calmodulin-binding protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24880.1).
Link
InterPro Scan - TAIR