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11-1413-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6779085 [Map]; Strand: c
      • AT1G19600.1 - [+] show detail - pfkB-like carbohydrate kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1413-1 - 5-prime edge 
    GATAAGAGCT GCGGGTTGGA GTCCAAGTAC GAGTGGAGCT TCAGGGCATT 
    TGGGCAAGGC CTCAGCTACC ATTCTCTGTT TCTCAGTGTG TAATCTATCT 
    GTGTTGTGTA ATCTCTATAA GGCCTTGCCC GATTGTTCTC ATCAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6779209 [Map]; Strand: c
      • AT1G19600.1 - [+] show detail - pfkB-like carbohydrate kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1413-1 - 3-prime edge 
    GATAACGTCG CTCCTGTTGA TTGGTCTTTA CTCGATCAAA TTCCCGGTGA 
    TCGCGGTGGC TCCATTGCCG TAAGCCATTC TTCTCTGTTT TTAGCAGTTA 
    TTTGAGTGTT TTCAGTGAAT TATCTCGTTT TTTGATGTGG GTTTAAGCAA 
    AAGTTTGAAT CTTCCTTTGG TATCGGAATC TGGATTTGAA TTGTTATTGT 
    ACTTGGCGGA TCTTTTGTGA TTCTAGGTGC AAAAGGATGA GTTAGAGCAC 
    ATGCTAAAAG AGCCTTGATG CACATATCAG TGTGGCTCCA TTAAAGAAGA 
    TGGCTGGAGG AAGTGTGACC AATACAGTTC GAGGCTTGAG TGTTGGGTTC 
    GGTGTAGCCA CTGGGATTAT TGGTGCTTAT GGAGACGATG AACAAGGCCA 
    ATTGTTTGTT AGCAATATGG GTTTTAGTGG TGTGAGTATC TCAAGGCTCA 
    GGAAGAAGAA AGGTTCCACT GCTCAGGTCT GTTTTGTCAA ACTGTTAAAT 
    TTTGCTTCTT CCTTATTGGG AAGAGTTGGT TTTGATTGGT GTTGTTTCTT 
    TTANTGTGTT TGCTTGGTTG ATGACTCTGG TANTCGAACA ATGCGACCAT 
    GTCTCTCNAG TGCTGNGAAN ATCAGGNTTG GNGTTCTAAT TTTTTGGGAT 
    ATATANNNAT ATTGAATNGG NTNGNCNNNG ANAAAGGATG GAAAANCTAT 
    TTNTCTTTAN GGCNNATNAN

AT1G19600.1

Model type
Protein coding
Short Description
pfkB-like carbohydrate kinase family protein
Computational Description
pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: D-ribose catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G27600.1); Has 11746 Blast hits to 11745 proteins in 2087 species: Archae - 257; Bacteria - 7533; Metazoa - 331; Fungi - 90; Plants - 444; Viruses - 0; Other Eukaryotes - 3091 (source: NCBI BLink).
Link
InterPro Scan - TAIR