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11-1423-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1128855 [Map]; Strand: c
      • AT3G04270.1 - [+] show detail - unknown protein; Has 7 Blast hits to 7 proteins in 1 species: Archae - 0; Bac...
        Distance: -775; Region: promoter
    Flanking Genome Sequence: 11-1423-1 - 5-prime edge 
    TNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTT GATTACCGAA GAACAAAGGA TNGATGAGTN 
    CGAATATTTN CTATATATAC CATAGCTTTT TGAGATTATG ATTTGTTTAG 
    ATAAACAAGA TCGTGTTGTG TTATTTGTCT CTGCTTCTTT ATTTAACATA 
    CGTATGGCAT CGTAACATCT TCATATGTTT GTAAATACAA TTATTTTCAC 
    TTTTGTTTTG ATATTACTTT CGAAAATATA TGAAAGTGTT ATCTATAAAC 
    TATATCAGGA ATCAGTGGTT CAACAATTAA TGATATCCAA GAAAAACGCT 
    GTGTATTATA ATGTGGATTA CGAAAGTTCT GACAAAATTT GTGTGAAATT 
    TTGTATGTCC GCTTTTTCTG TTTTCTTTCT TATGCATTTT CGATCATTTT 
    ATCTGAAATG TGTTACAATT AAACTAAATA TTCCTCTACT ACATAACGTC 
    AAGCTCACAT TATTTTTTTT NGGNNTTTCG GNNNAANGTT TTNAANCNCT 
    TNTTAAAAAA AATTTCCCNG GGGGGNNNCN TAAGCNTTTT TNNTCCCCCC 
    TNNCTANNNG GGAAAAAATA CNNCTTACCN NNGNANCGAA ACNTTNCNGG 
    AAAAACCGGG TCTNCCTTTT NTAAANGGNA AAAAAAAAAA TTTTTTTNCN 
    NNCNCNCNCN CCNNTTTNNN NCTNNCTTTT AAAATTTTCC CCNNGNTNTC 
    NNNNNGGTTG CCTTNTTTTA TNNTNAAGAA NNCCNCNGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1077183 [Map]; Strand: w
      • AT3G04110.1 - [+] show detail - glutamate receptor 1.1
        Distance: -145; Region: promoter
    Flanking Genome Sequence: 11-1423-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAT 
    ATCGCACACA ATCAAAGTCA ATGTGTACTG TTCATCGACA CAAATTGACT 
    AGGAAACACA TTTATTTCCT TCTAAAGTAT AGTTGAGCCT TAAAAAAAGT 
    TTTATTTAAT TTATGTTTTC AACAGTTACT TTTAAAACTT GATTTCAAAA 
    TCCAGGTTAA ATACAATGTA AAATACATAT GCAGGGGAAA CCATAATACT 
    AGATATATTA GCTTATTTCG CAAAGTCAAT TCGTAGAAGT AAATATTCGA 
    GTTCAAGTGA TAGGACAACC AAGTGATATA TAATAAAATC T

AT3G04110.1

Model type
Protein coding
Short Description
glutamate receptor 1.1
Curator Summary
putative glutamate receptor (GLR1.1). Contains a functional cation - permeable pore domain. Involved in cellular cation homeostasis.
Computational Description
glutamate receptor 1.1 (GLR1.1); FUNCTIONS IN: intracellular ligand-gated ion channel activity, cation channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus, cellular cation homeostasis; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 1.3 (TAIR:AT5G48410.1); Has 3355 Blast hits to 3282 proteins in 359 species: Archae - 20; Bacteria - 507; Metazoa - 2116; Fungi - 0; Plants - 613; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G04270.1

Model type
Protein coding
Computational Description
unknown protein; Has 7 Blast hits to 7 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR