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11-1433-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1043655 [Map]; Strand: w
      • AT1G04040.1 - [+] show detail - HAD superfamily, subfamily IIIB acid phosphatase
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1433-1 - 5-prime edge 
    GATACACACT CTTGAGGCAC CACATCGAAC TTTCTGATGT TGTGAACTTC 
    CACGTTGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1043539 [Map]; Strand: w
      • AT1G04040.1 - [+] show detail - HAD superfamily, subfamily IIIB acid phosphatase
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1433-1 - 3-prime edge 
    TGTGTATCGC ACATTAAGGA TTACATGACG TCATCGCAGT ACAAGGATGA 
    CGTGGCGAGA ACCGTTGATG AGGTCATTCT TCATTTCGGG AGCATGTGCT 
    GTAGCAAGTC TAAGTGTGAC GGCATGGACG CNTTGGATCT TTGATATCGA 
    TGACACGCNT TCTCTCTACC ATCCCTTACC ACAAGAAAAA TGGCTTCTTC 
    GGGTAATTTA TGAAATTCTC TATCTTACCC GGTTTAAGAT AAACCAACTT 
    GAATTGATGG GTGTTGTGTA TACGTAACTG TACATATTGT TACTTTTTAG 
    CTTTTTACTT AAGTGAATGC ACTTTGGATC TGACTGAACC GGACCGGATC 
    TCTGATTAGA GATGTGAATT TTAGATTTCG GTTCAATTTG GATTAATCTT 
    ATTTTTCTCA TGCTAATGGA TTAAAAACAG AGGAGAGAAA TTGAACTCAA 
    CGAAATTCGA GGATTGGATA CAGAAGAAGA AAGCACCAGC AGTGCCACAC 
    ATGAAGAAAT TGTACCACGA CATCAGAGAA AGAGGCATTA AGATCTTCTT 
    GATCTCTTCC CGGAAAGAAT ATCTCAGGTC TGCCACCGTC GACAACCTCA 
    TCCAAGCCGG TTACTATGGC TGGTCCAACC TAATGCTCAG GTACAACTAT 
    ACCGGATATT GAAGCCAAAA TCTATCTGTT TCATATATTC TCTAAAACCG 
    NTCAAAATCA AGATGAATCA AAAGTCAAGT T

AT1G04040.1

Model type
Protein coding
Short Description
HAD superfamily, subfamily IIIB acid phosphatase
Computational Description
HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT5G44020.1); Has 1079 Blast hits to 1077 proteins in 335 species: Archae - 0; Bacteria - 592; Metazoa - 2; Fungi - 0; Plants - 364; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink).
Link
InterPro Scan - TAIR