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Mutant Lines
11-1446-1

11-1446-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 7119678 [Map]; Strand: w
- AT4G11830.1 - [+] show detail - phospholipase D gamma 2
  Distance: 0; Region: exon2 (CDS)
- AT4G11830.2 - [+] show detail - phospholipase D gamma 2
  Distance: 0; Region: exon2 (CDS)

CTACTCGTAG CTAACGGAAC GAGTTGCTGG TCAAGCCACT GGCCAAACTC 
GTGGTTTGAC CCTCCTCCCA TTGACATAGT CTCGTTATAA ACTGGATGAT 
ACAAAATCAA AAACCTCCAA AGCAGGAAAC NTTTTAGTTG TCAGATCAAA 
TTTCAAGCAT AACCAAGTTC AGTGAGACAA AAGATCGATC ACTTGGTGCT 
TGGTGGGGAC TAATCGAGAG ATCAAGATTC AACAAAAGGA TAAAACTTTG 
AGATAATACA AACTCAGATC AAATCTATAT GAATAAATGT GGATCTAAAA 
ATATGGGCAA ATTCAAATTT AAAGTTCAGA TTTTTGTGAA GAAGAAGAAG 
AAGGTAGGAG GAAGCGAAGG AAAACGTTGA CTTGCAACGG AAGAATCGGA 
AAAATTTAAA GATTTTGGAT GCCGTTGTTG AATCGTTTAA CTTTAGCCAT 
TAATAACACA AATTTAAGAT CTTTAATCAT TAATTAAAGA ACTTAATTAA 
ACACAAATGC CGAATAAACA ATTTGTGTTT TAGTAACGAC GACTAAGAAA 
GAAGACTTGC CCACTTTGGT TTTTGGCTGC TCACAAAGCT CTTTCTCTCT 
GGCCCCTTTT TTGATGCAAC TTCATTTTGA TTGGNGATAT TTACTATTTT 
TTTTNGTCAA CCAAGAAAAT TAAACNTTTC TACATANTCA CTAAAATTAA 
ATCATATAGT AATGN

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 7119562 [Map]; Strand: w
  - AT4G11830.1 - [+] show detail - phospholipase D gamma 2
    Distance: 0; Region: intron2 (CDS)
  - AT4G11830.2 - [+] show detail - phospholipase D gamma 2
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 11-1446-1 - 3-prime edge
```
ACGAGTAGTG GCTCTTTGAT GGTTGAATTG TTACATGGTA ACTTAGACAT 
TTGGGTTAAG GAAGCTAAAC ATCTTCCTAA CATGATATGT TACCAGTAAC 
AAGCT
```

AT4G11830.1

Model type: Protein coding
Short Description: phospholipase D gamma 2
Curator Summary: Encodes one of three phospholipase D enzymes of the gamma class.
Computational Description: phospholipase D gamma 2 (PLDGAMMA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phospholipid catabolic process; LOCATED IN: cytosolic ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D gamma 3 (TAIR:AT4G11840.1); Has 2194 Blast hits to 1721 proteins in 407 species: Archae - 2; Bacteria - 532; Metazoa - 481; Fungi - 448; Plants - 557; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G11830.2

Model type: Protein coding
Short Description: phospholipase D gamma 2
Curator Summary: Encodes one of three phospholipase D enzymes of the gamma class.
Computational Description: phospholipase D gamma 2 (PLDGAMMA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phospholipid catabolic process; LOCATED IN: cytosolic ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D gamma 3 (TAIR:AT4G11840.1); Has 2065 Blast hits to 1596 proteins in 399 species: Archae - 2; Bacteria - 528; Metazoa - 398; Fungi - 435; Plants - 545; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink).
Link: InterPro Scan - TAIR