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11-1453-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16726815 [Map]; Strand: c
      • AT4G35140.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: -179; Region: promoter
    Flanking Genome Sequence: 11-1453-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTA TTTGAATTTT CACATTTCTT TTGATAAATT 
    CCCATTTTTA CTTCATGAAC TTTTAGCCCA TTATGGTGAT GATGATTCAT 
    AAGAAGCCCA AAAAGCCCAA TGCTAATTAG ATGTTAACAC GCNGTCGTCA 
    CCTTTTAAAT GGGCCAAACA ATCTTCTCTC TCCCGGCGAT GGGCTTACGC 
    AGTTACGCAT TACAAATACA CACTACGCTT CTTCGTCTTC TCTCTGTGGG 
    ACTTCTGAAG TAGTAATTTC ACGGCGAGAT ACAGAGCAAT TAGAGAATCT 
    TCTCTCTGGT CTATTACCGT GAAAAACTTT CTCCTATTAT AAATTTTATT 
    TCATAGGAAG ATGAGTGAGA AAGCGAGGAG AGGTCGATCA AACTTTAATG 
    GACTACATCA CCCTGTTGTT GATTTTTGGC GACGAGAGGT CGGTGGAATC 
    TCCTCTCGTA ATTTCTCCAA TCGCTTCTCC GCCTCCGAGG TTTGTGTTTT 
    CTCTATTGGA TTCGAAAGTT TCGAAATTTG TGGTTCTTCT ATGAGTCTCA 
    TTGGTGGATT TAGTCGTATC GTTCAATTGA CTAATTATTG NTATGATTCA 
    CAATTCTTAT ATTGGTTCTG TATATGTAGA ATTTGGTTCT GCGTTTAGAG 
    ATNTNCAAGA AGCTAGANAA GCACAAAGGG TGTGTAAACA CCGNGAGTTT 
    CAATGCCGAA GGAGATGTTC TGATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16726828 [Map]; Strand: c
      • AT4G35140.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: -192; Region: promoter
    Flanking Genome Sequence: 11-1453-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTNACTCCC 
    CTGGNNCTNC TCGATCNNGT ACCATNANAC NNNNAATCAC NAACNTATNG 
    AGGTTTTTCT CAAAGGAAAA TTTGGTTTAG CTCTTCCTCG GCTATGATTC 
    ATTTTTCGTA TATATGATCC TTTTAAGATC GATATGCGAT GATAAGAGAC 
    TGAACATCAT CAAAGTCTCT AACCTCATAT CGAGCAAAGC CAGCTTCTGT 
    AAGAACAAAG TCCCATTCTT TCAAAGTTCG TTCTTTGCCT GTGCTTGTGT 
    GAACCATCAT CACCATGTCA AGCTGCAATC TCACGTGCTC TAACTTGTCA 
    TCTCTTTCTT CCGCTATCAT CGTGTTTTTC TTCTCTCCGA TAACACACTC 
    CACTATCAAC ACTTTGCCGA TATTTGGTAG AACAGCTTCT TTGCAATTCT 
    TCAATATCTT TATGCAATCT TTGTCTCCCC AATCGTGTAA CACCCACTGC 
    ACCCATTCAA GTATCACATT TTACGTATTA GACCACTTAC GTCTTTTTCC 
    NACATACATA TGTACTTTGA TAAAATCTAC ACATATTTTA TTTATTTAAC 
    GAAAGCGCAA AAATATAANG TCCTGAAATG ACTTTATGAG CATTTNCTCC 
    ATGTTTTTTA GTAGTGGGTT GCTTTATTTT CTTGGGTCCT NGATAGTGGT 
    TGACACATTA ATTTCCTATN AATGGATTCG CCTACTTTGG GGCCGATCNN 
    AANNAATCAT GTTGTTTTTT NNTG

AT4G35140.1

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G38480.1); Has 10094 Blast hits to 7474 proteins in 477 species: Archae - 10; Bacteria - 1944; Metazoa - 3788; Fungi - 2083; Plants - 884; Viruses - 0; Other Eukaryotes - 1385 (source: NCBI BLink).
Link
InterPro Scan - TAIR