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11-1483-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4775847 [Map]; Strand: w
      • AT5G14770.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -150; Region: promoter
    Flanking Genome Sequence: 11-1483-1 - 5-prime edge 
    CTTGTGACGA CGCNTCGNAC TTCCAGGTGA ACTGAGAAAA AGAGTNTCGA 
    AGCTCAGACG ACGAGGNTTA AGTCCGGNAA TACCACGTCG TTTTAAAAGA 
    CTCAATAATA ACNGGCCCTA AATACATGGG CGTGTTTTTG GGCTATATCT 
    AAAATAAGCC CAACATATTA ACGTTTAAAC ATATTTCATA CATTTCGGAG 
    ATAAGATTTC GGAAAAATCT ATTTCACGAC GCTATTTCGG AGATAGATTA 
    ATAATGGGTT AAGTCGCAAA TTACTCACTT TTCTAAATTT AATTAGAAAA 
    GTAGTCACTT TACTATTNAT AATTNGNAAA NTAGTANNTG TNCNCNGGNG 
    GNGTGNTCNG NGANGTTNTG TGGGNNGAGN NNNNNNTAGN AANAAANAAN 
    ANANNNNNNC TANTCNTNNN NGNNGNGCGC NNATAGAGNN GNAGGTGNGN 
    NATNTNNNAG NACNGGTGGT AGGNANGNNG NTNGNAGCNN GGGGGGNNNA 
    AAGTTNTAGA NAGNAAATGN NNNNNTNNAN GNNGGAAAAN NNNGNNGNGG 
    GNNGGNNAAA GTAGNGANAN NNGAANNNTN NNGANNNNTN GNGTNNNNNN 
    ANATNAATGT NNTNAANGGT NCNAGNNNCT ANNCGNANGG NTNAANNNTG 
    AGGNTGNNTC NTTCNNGAGN GNNTNNTTNC NNGNNAANAG ANNGGNGGAT 
    AGGTNTNAGG GNCGTGGTGG G

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4775731 [Map]; Strand: w
      • AT5G14770.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -34; Region: promoter
    Flanking Genome Sequence: 11-1483-1 - 3-prime edge 
    GTCACAAGCA GNACGCCATG AGAGCTTGCA GGAGTCTCTG GAGAAATTTG 
    GAGATTTAGA TGAACTCCTA TCTATCTGCT GATGATAATG ATAAGGATTT 
    GGAATAACTA TAAGGGTAAA TACAGATTCT TCCTCTCAAA TTGCCGCTCT 
    TTCTCGTCAA TCAAACGACC CCAAATCCCA GAAAGCGAAG AGACTAGCCT 
    CTCGATCACC AGCN

AT5G14770.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 76339 Blast hits to 14879 proteins in 308 species: Archae - 3; Bacteria - 87; Metazoa - 1237; Fungi - 1442; Plants - 70832; Viruses - 0; Other Eukaryotes - 2738 (source: NCBI BLink).
Link
InterPro Scan - TAIR