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11-1485-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21447216 [Map]; Strand: w
      • AT5G52890.1 - [+] show detail - AT hook motif-containing protein
        Distance: 0; Region: exon1 (5UTR)
      • AT5G52890.2 - [+] show detail - AT hook motif-containing protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-1485-1 - 5-prime edge 
    ATAAACTAAC AAAATCGGTT ATACGATAAC GGTCGGTACG GGATTTTCCC 
    ATCCTACTTT CTCTTTTCTC TATCTCTCTC GGCGTTTTTG GTTTTTGGGG 
    AATTGTGTGG AAAATAGTTT ATTATTATAA TTTGAATTTA AATGGGCTGA 
    TTATGGGTTT CCTTATTAAA GCCCAATAAA CTCTTATCCA AATACAATTC 
    GTTTTGTTAA GGCTTTGTGT TGTAAACACA AAAGTGACAA AGAAAGAGCT 
    TAATAGTGAA TACATAAGGA ATTTTGGAAT TGTGAAATGG AAAAAAATAA 
    TGGGGATTAT TTTTAAAGAG AATAAGACAT CATGTTTTTT TTCTANATAG 
    TCATGTGTAT TTTTCTTCTT TTTTATTTTG AATTTTTACT ACTGATTAAA 
    TATAATATTT GCTTAANATT ATAATTTGGA ATCCGATCGA CCCTCAAAGT 
    AAGATTAAAA CAAAATAAAA ATAGTATAAG TTTATAGNGG TTTATTTTTA 
    ATCTGAATAT TACATCCAGT GAGTTTTTGG ATTTTTACTT TAATCAAATN 
    GACTTTTAAA TATATATTTT CTCTTTCAAC AAATAAAATA AAAGTTTTTA 
    ATGTACACAA TACAAGTGAT GTCAATTGTC AAATATACAT ATATACACAT 
    AATACAAGTA GAAGCAAACA ATTATGTAGT TATATTGNCT CAACCTTTAN 
    CTCTTATGTT TTTTTTCCTT NCNNTTTNGT AAATATATNG GNGNNCATCC 
    TTATCTATGG TNCGTGAAAA AAGGGGNAAA TNAGCTCNGG ANTA

AT5G52890.1

Model type
Protein coding
Short Description
AT hook motif-containing protein
Computational Description
AT hook motif-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA binding (TAIR:AT4G21895.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G52890.2

Model type
Protein coding
Short Description
AT hook motif-containing protein
Computational Description
AT hook motif-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA binding (TAIR:AT4G21895.1).
Link
InterPro Scan - TAIR