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11-1494-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 686431 [Map]; Strand: w
      • AT4G01580.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-1494-1 - 5-prime edge
    CCTCTGGATG CAGTTCATAT CATTGACAGC GACGATGATA TAATCGAGAT 
    TACAGGCAAA GAGTTTGTTG GAACTCAAGG TACAAGGAAG AATAATCAAT
    CTGTTAATGG TGGTGACACA GAGCACAAAT CCAAGAAGAG ACCAAGAGAC
    ATCGAGTTTG ACAAGATTCT ACACGGTAAG AAGACTTTGT TCATAACAAC
    GTTATGATTA AGAAGATTGG GATCTGAATA TCTTTATCTC TGTGTAGATG
    TTGATGTGAT GCAAGTGCTT AAAGAAGAAG AAGAAGACAA GAGAGTCCTC
    AGGGGATAAC AGAGCTTTTA ACAGAACCGA GACCTGCAAG TTTATTTGTT
    GTGTAATGTT AATTAATGAC TTGATGAAAC TAAATGAGTA GTGTTTTGAA
    TCCTGACCTG TAACAAGCTA TGTTAAACAA AACTGTAACC AGGTCTTGTT
    TTGATTCTTC TTTCTTTCAT CTCCTTCCTC AGCTTCTCTA CCTCTACCCA
    TTTCCCTTTA TGAGCTAACA GATTCGATAT AGCGACATAA TCTTCGCACT
    CANAACCCGA AAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 686363 [Map]; Strand: w
      • AT4G01580.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-1494-1 - 3-prime edge
    TCCAGAGGAT AGTTGGTCTC GCAAGCCGAA GCATTGAAGA TTATTACACG 
    GAAACTCGAA TT

AT4G01580.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G18960.1); Has 469 Blast hits to 437 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 469; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR