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11-1496-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 18771221 [Map]; Strand: c
      • AT1G50659.1 - [+] show detail
        Distance: 0; Region: exon1 (NonCoding)
      • AT1G50660.1 - [+] show detail - unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chlorop...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-1496-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCGG 
    ACAAGACTCT CACAACAAAG CGATTTTTTG GCTTCACGAA CTCAAAGCTA 
    TCTCTCTCCC TCTATCTCTG AGGCACGCAT TTTCGTCTGT GATTCTCGAG 
    CTCTTTTGGG GTTTCTCCGA GATTTTTGGT CGGTTCTTCA CGTTTTGTTT 
    ATGGCGGTGA TTACGTGATG AAAGTCACCG GAAAGCCGTA TTCGACGGCG 
    ACATTACCGG CCTTTGAGTC GGATAAGAAT CTCTTCTCTC ACGGTCCAGA 
    TCTCAGAGCT ATTCAAAGAG CTACTACTGT CACTAAACGT CGAGCTAGGA 
    ACCCGAGTTT GACTCGTCAG CGAAGATCCG GTCCTTCTGG TGGCAGACGA 
    AGCCGGCCGG AGACTCCTTT ATTGAAATGG AAGGTGGAGG ATCGGAATAA 
    AGAGAGAAGC GGCGTTGTAN AAGACGATGA TTACGAGGAT GATAATCACC 
    AGGTTGCGAG GTCAGAGACT ACTCGCCGCA AGGATCGGAG GAAAATCGCA 
    CGGCCTGTCT CTGTTANGAA ACTCGCCGCT GGGCTATGGC GGTTGCAAGT 
    TCCTGACGCG AGTTCCAGCG GCGGAGAAAG AAAGGGCAAA GANGGGTTAG 
    GGTTTTAANG TTCAATAATT CNAATNTTNT GGGAATTTAC CNGGATTCTT 
    GAGNTCCANA AATNTTGGGG GCANTTTACT TTGAAANTNA ATTGNTNNNT 
    NNGCATTTGG GAGAATAAAG

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 18771218 [Map]; Strand: c
      • AT1G50659.1 - [+] show detail
        Distance: 0; Region: exon1 (NonCoding)
      • AT1G50660.1 - [+] show detail - unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chlorop...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-1496-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAC TGAAACGAGA GAGAGAGAGA GAGAGATGAG 
    TATATGAATA CGTATATTTG TAAAACCCAT GTGTATTGGT CAACGGTATA 
    AGACCAAGAC GACGTCGTAT CATTAGAGAG TGGATGTGNA CGCGCNGTAT 
    TAGCGCGNGG GGAGCGTTTC CCTAAACTAC ATGGGGAGGG AGAGAGCTCT 
    CTAGCTNGGN GGNGCGTGTT GTTGCAGAGA GACGTNGGGA ATATATGATT 
    AAAGANTGTA TTTTAAAAAC AAAANTGTTT CAATAAATTA TTGGTGTACG 
    TGTTTTTTTT TTGTTANTAA AAANATNGTN CCNNGNGGGA TATNAAAANA 
    GGGGANGGGN TTTTGTTTTG TNNGNNGTNA NCCTNTNTTT TTTTTAAAAA 
    ANTTNTAAAA AAAAAANNGT TNNTTNNNAN CNNNCNGNGC ANAAAATTTA 
    TANNCCATTT TTNAAATCCC GATTNTTAAA NCNNTNTGGT TTGGAATNTA 
    AAAAAAAGGG TTTNGNCTGG NAAANAAANA AAGGGGCGAC AAAAACTTGA 
    NGGGGTNNCC TAATNNAAAA NGNCGGCNTT TGGNNTTNNN CNNCCNCCCA 
    NCCGNGAAAA AANACANTNC NNNNTTTTTT TTTTAACGNA ACTNAATTTN 
    NNNCTCGNNT TTTTTNTACA ANNNTTTTTN ANAGGGGGGT TTTTTTTANA 
    AANACCTCCC NNCCNNGGNC

AT1G50659.1

Model type
Other RNA
Link
InterPro Scan - TAIR

AT1G50660.1

Model type
Protein coding
Computational Description
unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins in 1325 species: Archae - 461; Bacteria - 2309; Metazoa - 11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other Eukaryotes - 4809 (source: NCBI BLink).
Link
InterPro Scan - TAIR