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11-1497-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21788988 [Map]; Strand: w
      • AT3G58960.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: -181; Region: promoter
    Flanking Genome Sequence: 11-1497-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCN ACTTACTACG GGAGAGCCGA GAGGCAGAGA 
    AAGCAGAAGA GAAGTCACAA ACTTTGACTT TGAGAGGACG ACGTACAAAC 
    TACAAACGCA GCCGAACCTA TTTCTATTTG GCAACGAGAA TTTTAGGGTT 
    TCGGAAAGTA AATCTGTTCG GTTTACTTTA AGGTAACTTG GGAGAAAAAC 
    CAAAACGAAA ATTTAGGGTT TTGGAAAGTA AAGCGGTTTG GCTAACTTTA 
    AAATTGGTTT GGTTGGACCA GTTTTAATAA CCAAAAATAA ACCACACCGA 
    ACCAAATCAA ATCAACCCAT AAACTTAAGT TCGACAACGG AAAGCAGTTG 
    ATGATGAACT CGATACCAAG GTAGAGGATG AATGTTTTGT GTGAGGAATA 
    TAGAGAAAAA TCATTGGAAG AGTAATAAGA GAGAGCTTTG AGAAGAGAGC 
    AAACTAGTTG AAGAGTTCAA TTATGTGCAC AATTAGGTTT AAACATTTTA 
    ATGACTTCGA TGTCTGAATA TAATTCTCTT CAACATATAT ACTCTTATAT 
    CATTTCCATC TACATGTGTT CCTCAACAAC ATATATGAAT CACTAACGTC 
    TTCACTGGAC AAGATATGAG TGAAACAACT CTGGCCAGTA NCNATGTNTA 
    AATTATTACA CAAGTGGCNC ATGGGTTTGN NANGAAANAN GGANGATTNT 
    AACCCTAGCA NCTTNTTCCA CCTGGC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21788996 [Map]; Strand: w
      • AT3G58960.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: -189; Region: promoter
    Flanking Genome Sequence: 11-1497-1 - 3-prime edge 
    AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCG 
    CGGGTAGTAA GGTATTTCTG AAAATTTCTA ACCATGGTTT CTTATAGTCT 
    CACGTAGTTA GTATTGCTTC TTCTCCGCAT ATCTTCGGTA TATATCTCCA 
    CTTTCAAAGT ATTTTCGTTT CCAGAGAATC GTATTATGAC NGTTTCTATG 
    TTTGTAGATC GAGAACTTTC TTCCAATTAG TTGAGTAAAG AGATGGATAG 
    AATCAGCAGT CTATCAAATG ATATCATTAG TAACATCGTA TCTTTCCTTT 
    CGGCAAAAGA CGCTGCTGTC GCATCGGTTC TCTCAAAGAG GTGGCAAAAT 
    ATCTATACCA TCGTACCAAA TCTTGAGTTT GATAACACAC TTGAGAATCA 
    AGGAAGTTTG ACGGATTTCT TGAATGGTTT GCTGGCTCTT CCGGCCAGTA 
    CCCGCATAAA GAATGTCTCT ATAAAACGTC GCGGGCGTGA TGGACCAAAT 
    CGTGATGCTG ATCTCAACCG TTTTCTCTGT AATGTGCTGA AGCGTGGTGT 
    CTTGAAGCT

AT3G58960.1

Model type
Protein coding
Short Description
F-box/RNI-like/FBD-like domains-containing protein
Computational Description
F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G58980.1); Has 1635 Blast hits to 1579 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1633; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR