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11-1499-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16314169 [Map]; Strand: w
      • AT3G44765.1 - [+] show detail - other RNA
        Distance: 142; Region: intergenic
      • AT3G44770.1 - [+] show detail - Protein of unknown function (DUF626)
        Distance: -1911; Region: intergenic
    Flanking Genome Sequence: 11-1499-1 - 5-prime edge 
    NTCACAATAT CTGAAAACAC ACACTTTCAC AAACACGGAA AAGTNNCAAA 
    CTCAAAACAC ACCCAAAGAC AACAATAGNA TCAAACTCTA CAAAAAAAAA 
    TCACATCACA CGGCAACAAA ACCTATAGGC ATACTCAAAC GAAACAAAGC 
    TCAAACTCAA CATAACACAA GAAATAAAAT ACAGCACAAC AAAAAACTAG 
    ACACATGAAA GAACGAAAAA ACAATCAATA TATTTCTTTA CAGTAAAAAA 
    ACTTTGNGAT TTTGTNGCTA AGTCAATTTC AGGGGAAATT NCTTTCTCTT 
    TCTTTTTTAG TCATTTACAA CTATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16314104 [Map]; Strand: w
      • AT3G44765.1 - [+] show detail - other RNA
        Distance: 77; Region: intergenic
      • AT3G44770.1 - [+] show detail - Protein of unknown function (DUF626)
        Distance: -1976; Region: intergenic
    Flanking Genome Sequence: 11-1499-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCN 
    TNANTGNGAG NNNCCGCACN GANCCCAGAT NGCTNTGCAT GACNCAANTG 
    ACATGAGAAT AAAGAGAGAG ATACCTGACC TCCCACATGC TTTACCTTCG 
    AATGTTTTTG TTCTTTGGAC CTCAAAGATA TCTCCATGAA GCAGGACACA 
    CAACCTCTCG TTTTCTCTTG ACTACTGAAC CAAAATTTCA CCTGAAAGTA 
    CATCATACAA ATAGGACAAT AAAATGAAAC GACAAAATCA TTGCCAAGAA 
    AGAAAAAAAA ACATGGTAAG AGTCTTACAG ATCCAAAATC TTACTGGTTG 
    CTAATATTTT CTACTTTTAA TCTTGACGGA AAATGTGTTA ACAAAGAGTN 
    CAACTGAAAA ACATAACTAT CAAAGTTAGA AAAACAATCA CACTTTAAGA 
    ACACATTAAG GANACTGCAT CATCTTAGAA ACAACACATA TAATTTAAAG 
    AGNGTTCTAA AACTTACATC AATGTTCTCG TCTCCAAATT GAGATATGAA 
    TTGCCACTTG ATTGCTGAAT CATATGACCA CAAGACTGAT AAGAGTTCGG 
    TAACATAAAA CATGCAATTA TTGAAACACG GAATATCGAN ATAAACAATG 
    NTNTGTGATG CCATTTAATC TTTCTTGNNT GAATATAACA NTGGGACNAT 
    TTTTTCCAAA TCATTCACCC NTAGAAACNC NTNANCNCNG NGNTNGNCTT 
    ATAACCAAAC CCNNTTNGTN CNA

AT3G44765.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Unknown gene
Link
InterPro Scan - TAIR

AT3G44770.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF626)
Computational Description
Protein of unknown function (DUF626); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT4G29550.1); Has 172 Blast hits to 171 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR