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Mutant Lines
11-1507-1

11-1507-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 337586 [Map]; Strand: c
  - AT1G01960.1 - [+] show detail - SEC7-like guanine nucleotide exchange family protein
    Distance: -4; Region: promoter
  - AT1G01970.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: -705; Region: promoter
Flanking Genome Sequence: 11-1507-1 - 5-prime edge
```
TACATAGATA GATACTCACT CTCCTCTTAT AGATCTAAAT TGGTGATTCG 
TTGAAGTCAC GGCTACCAAT CTGGAATGGC TTCTACGGAA GTCGATTCCC 
GCTTAGGTCG AGTTGTTATC CCTGCTTTGG ACAAGGTCAT TAAGAACGCC 
TCCTGGCGTA AGCACTCCAA GCTCGCCCAC GAGTGCAAAT CCGTCATCGA 
ACGCCTTAGA TCCCCTGAAA ATTCCTCTCC TGTTGCCGAC TCTGAATCTG 
GATC
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 337702 [Map]; Strand: c
- AT1G01960.1 - [+] show detail - SEC7-like guanine nucleotide exchange family protein
  Distance: -120; Region: promoter
- AT1G01970.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: -589; Region: promoter

TCTATGTAGC CCAGAGAGAA CGGATAACAA CAACAAGAGC AACGCCTCCT 
CCTCTGCGAT CCAATCAAAG CAGTATTCTT ATCAGGGAGT CAGTGAATTA 
CAGACATCTA CGAAGATGAA GCAGACGAGA CAAAAAAAAA ANNGGGGNNC 
TNGNGNGAAG TACCCANTTT ANTAAAANTC CGANANANCC AANTTNGGNT 
CNCCGCCCTN NCCTTTTTTT NAAANGNCTT NTTTTTCCTN GANTAGGGGG 
GGNANNGTCN CCGGNTTTGN GGGCNTANTN GGTTTTTTNA AANNGACAAN 
TTNCCANCCN GGNCCGTNNN CCNCCCNNGC CCCTNNAGGG

AT1G01960.1

Model type: Protein coding
Short Description: SEC7-like guanine nucleotide exchange family protein
Computational Description: embryo sac development arrest 10 (EDA10); FUNCTIONS IN: binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity; INVOLVED IN: megagametogenesis; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT3G60860.1); Has 2904 Blast hits to 2648 proteins in 246 species: Archae - 0; Bacteria - 34; Metazoa - 1480; Fungi - 646; Plants - 300; Viruses - 0; Other Eukaryotes - 444 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01970.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G19520.1); Has 15559 Blast hits to 6864 proteins in 176 species: Archae - 0; Bacteria - 16; Metazoa - 92; Fungi - 19; Plants - 15148; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink).
Link: InterPro Scan - TAIR