1. Home
  2. Mutant Lines
  3. 11-1541-1

11-1541-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11191748 [Map]; Strand: w
      • AT1G31290.1 - [+] show detail - ARGONAUTE 3
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-1541-1 - 5-prime edge 
    ATTCTCAGGC CCCCGAGAAA CGACCTAACA AGATTGTGAT ATTCCGTGAT 
    GGTGTCAGCG ATGGTCAGTT CGATATGGTT CTCAATGTGG AGTTACAGAA 
    TGTTAAGGAC GTTTTTGCCA AGGTTGGCTA TAATCCGCAG ATAACTGTAA 
    TTGTGGCACA GAAACGTCAT CAAACCCGTT TCTTCCCCGC CACAACTAGC 
    AAAGATGGAA GGGCTAAGGG CAATGTGCCT TCAGGTACGG TCGTTGATAC 
    CACGATCATT CACCCGTTTG AGTATGATTT CTACCTCTGT AGTCAACATG 
    GAGCGATAGG TACAAGCAAA CCAACTCATT ATTATGTTCT TTCGGACGAA 
    ATCGGGTTCA ACTCGAATCA GATTCAGAAA CTCATCTTTG ACTTGTGCTT 
    CACGTTTACT CGCTGCACCA AACCGGTCGC TCTGGTTCCT CCGGTTTCTT 
    ATGCTGACAA GGCTGCTTCT AGAGGAAGGG TGTACTACGA GGCAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11191684 [Map]; Strand: w
      • AT1G31290.1 - [+] show detail - ARGONAUTE 3
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-1541-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGCTGAGAAT GAGCTTCGAT AAGCTCCCAG CAAGTTTCAC CAAACCCTTG 
    TATCTCTTCT TTACGGTGAC TCTGAGCTTT GACTCTAGCT GCGTAGCGGT 
    TAGCTTCAGG CCAGTTAAGA GTGCCTACAA CAGCAACAAT GGATGGACTC 
    ATATTGTCGT GAGCAGCGGG ATGATTGACA TCAGCACCAA TGAACATGAC 
    CTTATCTTCT TTTTTGAAGA AAGAGAAAAT ATTATCCACC AACTCCACGT 
    TCGTTCCACC AACCTTTGCG TTTATCTTGA GGGCGAGATT TGCCAAGTAC 
    TGATCAGAAA CGGTTTCTCC TTTAATGGCA GATATGGTCA AGAAACACTG 
    AGTCACTAGA CCAAGTTTGG TNTCGGCTAT CCATTTCAGA GTCTTGTATC 
    CATCGTGCTT CCCAGTCATA GCACACAGAA CAAGAGTTGG ACAAGCCCCA 
    CCATGGTTAT GAGAAGCCTC ATCTATCACG GATCGAAGCA ATTCCTCAAG 
    AGCATTACCA TCATAAAGTG TTTCCATACT CGATGNTTTG CAAACGATAG 
    GAGCCTCCAT CTGCATCCCA AGTCCCTTAC AACGNTCGAT GAGTTTATTT 
    ACAAAGTAAC CAGGCATCTT TTTTTTCAAA CTCTCGGATG CAGTGAAGTC 
    AAGAACAGCC CAATGCTTGA TTATTGAACC CTTTGTGACT C

AT1G31290.1

Model type
Protein coding
Short Description
ARGONAUTE 3
Computational Description
ARGONAUTE 3 (AGO3); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT1G31280.1); Has 87664 Blast hits to 32385 proteins in 1910 species: Archae - 110; Bacteria - 26465; Metazoa - 27622; Fungi - 6311; Plants - 10699; Viruses - 1201; Other Eukaryotes - 15256 (source: NCBI BLink).
Link
InterPro Scan - TAIR