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11-1543-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14770099 [Map]; Strand: c
      • AT4G30180.1 - [+] show detail - sequence-specific DNA binding transcription factors;transcription regulators
        Distance: 451; Region: intergenic
      • AT4G30190.1 - [+] show detail - H(+)-ATPase 2
        Distance: 400; Region: intergenic
    Flanking Genome Sequence: 11-1543-1 - 5-prime edge 
    CATCCAACTT TCCTCCTTTT TAGATATTTA CAATTTCGGC GTTTTGTTTT 
    TCATATTCAT CGAATTTTTT GGAAAGTAAT TCTAGTCCAG TAGTCCTAAT 
    TTTTGTTTAC ATTTTAATGG TGCACCTTGT AGTTACNTGC AGCNTGGAAC 
    ATATTGGTGA TCTCTACTAA TGTGTAGCTT TTATTTAATT GAAGATTTGT 
    TACATCTGAT TTTTTGTAGT CGAAAGTTCA TATGTTTTCG CTAAAGGAGA 
    AAAAAAACTT GCAGGAATAT AAATATATAC ACAAACACGA AGTTTGTCAG 
    GTTAAAATGA TTAGAATATT AAAGTTTGGA GATTTGCTCA TAACATTAAA 
    ATAATAAATT CAGGAAAAAA AGACAACATA AGAGTTTTAT TTTAGGCAGC 
    ACATCGTCTA TTTGGCATTA CAACCAATAA TTTAAATTTC AATCANATTT 
    TGATCGAATT TTATAAGATG TACGTATAAA CGGCCATGTG TGGTACTTTA 
    GGTATTTCGG TAACCATGAT TAATTAAGAA AAGGAAAAAA GAAAAACACT 
    ATAATACATG CTCTTGTTCT TAANGAAATC NGAGAAAAAA AACCCCCCNN 
    NTGATTTTCN TTTTNGACAC CCNAAAAACN NGAACAAACN NTAANNNATN 
    CCCTNAANCT AAAANNNAGG TCNTNTTTTG AACAATGGG

AT4G30180.1

Model type
Protein coding
Short Description
sequence-specific DNA binding transcription factors;transcription regulators
Computational Description
sequence-specific DNA binding transcription factors;transcription regulators; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G18969.1); Has 115 Blast hits to 115 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G30190.1

Model type
Protein coding
Short Description
H(+)-ATPase 2
Curator Summary
belongs to the P-type ATPase superfamily of cation-transporting ATPases, pumps protons out of the cell, generating a proton gradient that drives the active transport of nutrients by proton symport. has two autoinhibitory regions within the C-terminal dom
Computational Description
H(+)-ATPase 2 (HA2); FUNCTIONS IN: ATPase activity, hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 1 (TAIR:AT2G18960.1); Has 36409 Blast hits to 32614 proteins in 3160 species: Archae - 700; Bacteria - 23090; Metazoa - 3798; Fungi - 2556; Plants - 1882; Viruses - 3; Other Eukaryotes - 4380 (source: NCBI BLink).
Link
InterPro Scan - TAIR