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11-1556-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2448032 [Map]; Strand: w
      • AT4G04830.1 - [+] show detail - methionine sulfoxide reductase B5
        Distance: 946; Region: intergenic
      • AT4G04840.1 - [+] show detail - methionine sulfoxide reductase B6
        Distance: -1528; Region: intergenic
    Flanking Genome Sequence: 11-1556-1 - 3-prime edge
    TGTACGTGTA TGTATTTTTC CATACCTACC AAACTTGAGA TCCCATCTTG 
    ATCAGCTAAA ATTTGTGGTT TTGATTGGTC GATATCCCAA ATGAAAATAT
    CCATTAGTAG GTATGTAAAA GATAGCTAGA GTTTAATTCG AACAGAGAAT
    ATTGCTTTAA AAAGAGAATA ATGCTTCTAG TGTAATAAAT AGATATATGA
    TATAGTCACA TGCTAATGAA TTATCAAACT CAAAACGGGA CAACCATTTA
    TAGTGAATCA AAAACACATT CGAGTACTTT TCCACATGAC AAATTATTGG
    CAAACAAACC AACGTCTCAA TTAGGGGCTG GGAAAAAATC GGAACCAACA
    ACCAGAACCG AAACTGACCC AAAAAATTGG AACCGAAACC GAACCCGAAG
    ATTTACCTTA TTGGATC
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2448146 [Map]; Strand: w
      • AT4G04830.1 - [+] show detail - methionine sulfoxide reductase B5
        Distance: 1060; Region: intergenic
      • AT4G04840.1 - [+] show detail - methionine sulfoxide reductase B6
        Distance: -1414; Region: intergenic
    Flanking Genome Sequence: 11-1556-1 - 5-prime edge
    CACGTACACA TCCAGAGAGC GAAGAATTTG TGATGAATTT CTAATAAATA 
    TATGAGTTGT TGAGAAAACA ATATTTCAAC TAATCTTATA TTTATAATGG
    TCCCATGCAT GATACAAACG TGGTCGTTAT CTCGTCCATA TGACCAGTG

AT4G04830.1

Model type
Protein coding
Short Description
methionine sulfoxide reductase B5
Computational Description
methionine sulfoxide reductase B5 (MSRB5); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B4 (TAIR:AT4G04810.1); Has 8417 Blast hits to 8406 proteins in 2250 species: Archae - 78; Bacteria - 4939; Metazoa - 269; Fungi - 135; Plants - 208; Viruses - 1; Other Eukaryotes - 2787 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G04840.1

Model type
Protein coding
Short Description
methionine sulfoxide reductase B6
Computational Description
methionine sulfoxide reductase B6 (MSRB6); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B9 (TAIR:AT4G21850.1); Has 8335 Blast hits to 8332 proteins in 2250 species: Archae - 76; Bacteria - 4945; Metazoa - 267; Fungi - 135; Plants - 207; Viruses - 1; Other Eukaryotes - 2704 (source: NCBI BLink).
Link
InterPro Scan - TAIR