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11-1564-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 7147257 [Map]; Strand: c
      • AT5G21040.2 - [+] show detail - F-box protein 2
        Distance: 0; Region: exon1 (5UTR)
      • AT5G21040.1 - [+] show detail - F-box protein 2
        Distance: -128; Region: promoter
      • AT5G21050.1 - [+] show detail - LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING:...
        Distance: -633; Region: promoter
    Flanking Genome Sequence: 11-1564-1 - 3-prime edge 
    CCGGACGGTG CTATACTAAC CGTCCGATCG AAAAACAAAT CAAGCGTCCA 
    GATCGTACGA TATGAGCAGC TACAACACAT GTATATCTTT GTTTTATTAT 
    ATAAGATTGA TCCTATTTTT GCTGCGTTAT ATTCTCAAAG TTTTCAAAAT 
    TCCACAATAA GTGATTTTTA GTTGTAAATA CGCTTTTTCT AGTAAGAGTA 
    AGATTTTGCA TGGAGATCAT ATATCACATG TTCTTCCATG CAACCATGAC 
    CTTGAAGCAA TAGCTTATTC TTGTCCAATA ATGCTATTGG CGCCAGAGGG 
    AAGTGGACAA AGAAAGAGTT TTTGTGAGAT C

AT5G21040.1

Model type
Protein coding
Short Description
F-box protein 2
Curator Summary
Encodes an F-box containing protein that interacts physically with BHLH32 and appears to be involved in mediating phosphate starvation responses.
Computational Description
F-box protein 2 (FBX2); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), F-box domain, cyclin-like (InterPro:IPR001810), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), F-box domain, Skp2-like (InterPro:IPR022364), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G21040.2

Model type
Protein coding
Short Description
F-box protein 2
Curator Summary
Encodes an F-box containing protein that interacts physically with BHLH32 and appears to be involved in mediating phosphate starvation responses.
Computational Description
F-box protein 2 (FBX2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular response to phosphate starvation; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), F-box domain, cyclin-like (InterPro:IPR001810), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), F-box domain, Skp2-like (InterPro:IPR022364), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1).
Link
InterPro Scan - TAIR

AT5G21050.1

Model type
Protein coding
Computational Description
LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64090.1); Has 206 Blast hits to 206 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR