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11-1568-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9386764 [Map]; Strand: w
      • AT4G16670.1 - [+] show detail - Plant protein of unknown function (DUF828) with plant pleckstrin homology-lik...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-1568-1 - 5-prime edge 
    CATTGAGAGG AGAAGCAGCT TTGAGGGTAA GACTACCAAA GGAAGCTAAG 
    AACAGTGCAG CTATAAGCCC CTGTGAGAGA GTTTTACCAG AGACTCATAG 
    TTGCTCTTCT GAGCTCGATC GCACTAGCAC GACCGATGAA CTCATATCTG 
    CAAAAGGAGT TGAAGAATCA ACTGGAGAGC TAATGCAGTG CACACGAAAC 
    GGTAATGTTT CAGTAAGAGC TTCTTTACTA ATTGTTGTGA ATGATGATGA 
    TATTATAATT CAAGAATCAA TTGGAAACAA AAAATTTTCA CTTACCACGA 
    GATTGATGAA TTGACTCATG GACTTTCCAG GTGTTCTGCG GTGGAAGCAT 
    GTAAAAGTGT ACATCAACAA AAAATCTCAG GTTAAACATC GAATACTCAT 
    TGAAGCTAAC AAAGTTATAT GCTGGTTGAA TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9386648 [Map]; Strand: w
      • AT4G16670.1 - [+] show detail - Plant protein of unknown function (DUF828) with plant pleckstrin homology-lik...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 11-1568-1 - 3-prime edge 
    TCTCAATGCT ACATTATCGA AAAACAGAGA ATCATAATCG AATGATCAAC 
    TCAAAACTAC AATGGACTAG TCAAATTCAA TAGAGCGAAA CAATCAAGGA 
    TTAAGAATTG AAGTCAAACA ATCAATGTAC CTGTTGCAGC TGCAGCAGTT 
    AGAGTCAACA AATCGCCAGG TCCACGAACA TCAACAGCTG ATCGGACAGC 
    AGAGACGACG CGATCGTGAT CTGCGCCGGC AAGCTCCGCC AATTCGAGGC 
    AGTGAGAAGC TAACAACTCC GACGCCGAGG CAAGGGCTGA GCTCATCTTT 
    GATCCAGCGA AGCCGTCTTG ATTGCCTGAA GCGGTCACTG CGGCGATTGC 
    CGTCGCCAGA GACGCAATGG ACACGGCGGA ATGCAGATGA GCTTTCTCCA 
    CGCGAACTCT ATCTCTCTTC TTTACGGCGG AGACCTTCCC GCCGACGAAT 
    T

AT4G16670.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region
Computational Description
CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT4G17350.1); Has 215 Blast hits to 188 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 208; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR