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11-1580-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12185166 [Map]; Strand: c
      • AT4G23310.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 23
        Distance: -571; Region: promoter
    Flanking Genome Sequence: 11-1580-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTGA 
    TTAGTAGTTT AGTAGAACAA AATGTATTTA CTTGGAATGA AGTGTAACAA 
    CCGTTTTATT ATTTTTTCTT TTTTTGGTAA GTTGACTGAC GTAAAAGAAA 
    TTGTATTCTC TTACAGATAA TTAGTGTCTG GCNTTCAGAC TCTTCATCAG 
    GACCCATAAA CAAAGAAAAA ACAGAAAGAA AAGGAGAAGA ATAAATTTCG 
    GTTATGCCTC ATTCGGTTAT CTTCTTTTAC GCCTTCCTAA CTTCCTTACA 
    ATTAAGCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14864059 [Map]; Strand: w
      • AT4G30390.1 - [+] show detail - unknown protein; Has 22 Blast hits to 22 proteins in 11 species: Archae - 0; ...
        Distance: -874; Region: promoter
    Flanking Genome Sequence: 11-1580-1 - 5-prime edge 
    CATGTAGTAT ACGGCTATAC TAATAATGAT TCGTGAGAAA AGGTGTCGAA 
    TGGAGAATAT TTCAAACAAT TGACTAATCT CTTAGATTCA AATTTTAGGT 
    TGGAATTATT AGTTAAGAAA AAAAGAAAAA AACATGTACC TGACAAATTA 
    GTTGTTACAA GATCGTGGGA GATCTAACTT AAAAGTTCAT TGTCCCATTG 
    ATCCCAACCC TAAGATGTTT TTCATTATTT TCACATTGAG TATCAACGTA 
    TAATTCAAAA CCAACTAATC TGTGTTTTTG TCTAATCTTG TATAAGAACT 
    CTACCAGTTT TATGATCAAA CTTTTTATCA ATTATGCTTT TGGCTCATGG 
    GTCTATCTTG CCAACATCTT TTAAATCAAT ATAACATTTT GTCTTTACAG 
    ATAAATTGCA TCGTTACGGG ATGATTGTAT TCATCGAATT

AT4G23310.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 23
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 23 (CRK23); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf whorl, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 19 (TAIR:AT4G23270.1); Has 121765 Blast hits to 118949 proteins in 4447 species: Archae - 102; Bacteria - 13740; Metazoa - 44280; Fungi - 10260; Plants - 35406; Viruses - 410; Other Eukaryotes - 17567 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G30390.1

Model type
Protein coding
Computational Description
unknown protein; Has 22 Blast hits to 22 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR