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11-1594-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 371022 [Map]; Strand: c
      • AT2G01830.1 - [+] show detail - CHASE domain containing histidine kinase protein
        Distance: -3342; Region: intergenic
      • AT2G01840.1 - [+] show detail - transposable element gene
        Distance: 2103; Region: intergenic
    Flanking Genome Sequence: 11-1594-1 - 3-prime edge 
    GATTTAGTAG TACACAAAGA TAGGGGGAAA AGGGGGTACA CAAAGGAAGT 
    GGTGCTAACA AAATGTGTGT GTGTCGGCCA TGTGAGATTC ATGTTTGACT 
    TTATATCATT AAATCATTTA GTGGTTACAA TTTACAAATT CTCCTTATTT 
    ATTAAGATTT TATAAGATTT TGTAACATAT TCTATTTTTC GGTGTTTGTA 
    TTTACTCTCA AATTATGTTT TTTTGTCACA TGCTCGACAA TCACTCCCAT 
    TCAACCAATT CATTTATTTA AAATAACACC AAAACCAATC CACTGTATTT 
    CATAAATTAA TTTGGTTATA TTTTCGTTAG TTCTTATACT GCATGTTTAT 
    AACTTTTAAC GATTCTTCAT ACAAAGTGTT CACTATTTTG AGTCAAAAAA 
    GCAGACTAGT GTAATCGTCC TTTCTTCAAA AGTTTATATA AACAATCACG 
    ATTTAATAAT TACTATCTCA ATCAATCGTA ATTCGAAAGT CCAATAGAAT 
    ATTTTATAGA GATAAGATCA ACTACATTCA TTAAATAAGA TATCCTATGT 
    TAAACTATAA TTATCACTCA TAAATCAACA TCGATCAATG ATTCTTTGAC 
    CAAGATAAAG TTATTGTAAT TAGGTGAAAA AATCCAAAGA TTTCACACTC 
    AAATGACACA CAAAATCTAG CATATTTGTT TTCAAGAATA AAGATTGTCC 
    ATGTTCATGA ACAAACACA

AT2G01830.1

Model type
Protein coding
Short Description
CHASE domain containing histidine kinase protein
Curator Summary
Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane
Computational Description
WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 136787 Blast hits to 109703 proteins in 3011 species: Archae - 761; Bacteria - 121785; Metazoa - 32; Fungi - 2267; Plants - 2388; Viruses - 27; Other Eukaryotes - 9527 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01840.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 9.6e-34 P-value blast match to GB:NP_038607 L1 repeat, Tf subfamily, member 9 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR