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11-1626-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22607024 [Map]; Strand: c
      • AT3G61070.3 - [+] show detail - peroxin 11E
        Distance: -146; Region: promoter
      • AT3G61070.1 - [+] show detail - peroxin 11E
        Distance: -258; Region: promoter
      • AT3G61070.2 - [+] show detail - peroxin 11E
        Distance: -246; Region: promoter
      • AT3G61080.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -106; Region: promoter
    Flanking Genome Sequence: 11-1626-1 - 5-prime edge 
    GTCCAAGCTT ATTTCGGTGA CTGTTTGGAT ACAAAGTTAT CTTCATCCTT 
    GTCTTGTTTA ACTTCAGAAC CAGCTTTTTT AAAAAATGAA AAAAATAAGG 
    CTTCTTGAGG CCTGGCCCAT TAACACTACG AAACGCNTGC GTTTTAAGAT 
    GTGTTCTCCT TCCTCGATAA GTGTGCCACA CGCGCGTATA GATGAGGCCT 
    GTGGTGTACA CGGAACTTAT CGACGGTTAG AAATGAAACG ATTAGGAGAT 
    TAGATCGTTG AACAAAACGA CGTGTTTTGG TCTATTTATA AAGAAAGAAA 
    TAAAAAGGAG AGATGACCAA ACACGCCTTT ATCATAGTTT CTATCTCCGA 
    TGACACAAAA CGAGGAAGAT TATTTGACAT TTTAAGTAAN AACAGCTAGC 
    TTTGCCATCT CCCTAAAGGC AATAAATCTC GGATCCACTT TCACGATATT 
    TTGATATTTT TTCTATTTAT AATCTTTCTG GGTTTTGCGT CTTTTGAAGG 
    CTGAATTGCT CTGAAATCTC AATTGTATAA TCATCTCCTG GGTCGTCGTT 
    ATCGTGATCA TCTAGGTAAG TGGAATCCCA ATTTCTGAAA TTTTTGAATG 
    TTTTCAAGTT TCACATGCCT TANATTTGAC GTTCTTTTTC ATTTTTGTAA 
    ACTTGCTAAT TGCATTGGTG GGTTTNAAAT CTTTGGGGTN GGNGATGAAG 
    TNAATGNTCT GGCTTGAATT GANCA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 336829 [Map]; Strand: c
      • AT1G01960.1 - [+] show detail - SEC7-like guanine nucleotide exchange family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1626-1 - 3-prime edge 
    TTTTNNGGAA NTGAGGTATT TTACTTTAAC CGNTACCGAC CGTTTNCATC 
    NCTTGTAACN NANGGNACTG CGCGTTTGCG GTCGNNATTC TGATNNAANN 
    CNNGNNCCTC CANTAACTCT GCCANAACTA TGGTGCTNAC TGGGGACGCG 
    TGGATNAANT TGTNTACATG GNTGTAAACA CCNANACACC AGAGNNCCTG 
    NNCCGACNNT NGGGTCCTTG NTNACCNACT GATCACACAC ACCCGGGCTG 
    CTTTCACAAN NCTGANNCCN TAACAAGTCC TGACNATCTG TANCNGAGAA 
    TCTCCATGGN TCCTCAGGGA AATTGAAGTT ACCGCAGTCA AGAGCGTCTT 
    CANCACNGAG CAACTCNANC CNGN

AT1G01960.1

Model type
Protein coding
Short Description
SEC7-like guanine nucleotide exchange family protein
Computational Description
embryo sac development arrest 10 (EDA10); FUNCTIONS IN: binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity; INVOLVED IN: megagametogenesis; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT3G60860.1); Has 2904 Blast hits to 2648 proteins in 246 species: Archae - 0; Bacteria - 34; Metazoa - 1480; Fungi - 646; Plants - 300; Viruses - 0; Other Eukaryotes - 444 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G61070.1

Model type
Protein coding
Short Description
peroxin 11E
Curator Summary
member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.
Computational Description
peroxin 11E (PEX11E); INVOLVED IN: response to light stimulus, peroxisome fission, peroxisome organization; LOCATED IN: mitochondrion, peroxisomal membrane, integral to peroxisomal membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11D (TAIR:AT2G45740.3); Has 282 Blast hits to 282 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 35; Plants - 180; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G61070.2

Model type
Protein coding
Short Description
peroxin 11E
Curator Summary
member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.
Computational Description
peroxin 11E (PEX11E); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11D (TAIR:AT2G45740.3); Has 282 Blast hits to 282 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 35; Plants - 180; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G61070.3

Model type
Protein coding
Short Description
peroxin 11E
Curator Summary
member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.
Computational Description
peroxin 11E (PEX11E); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11D (TAIR:AT2G45740.3).
Link
InterPro Scan - TAIR

AT3G61080.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructosamine/Ketosamine-3-kinase (InterPro:IPR016477), Protein kinase-like domain (InterPro:IPR011009); Has 2101 Blast hits to 2101 proteins in 833 species: Archae - 8; Bacteria - 1432; Metazoa - 140; Fungi - 164; Plants - 42; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink).
Link
InterPro Scan - TAIR