1. Home
  2. Mutant Lines
  3. 11-1652-1

11-1652-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11611346 [Map]; Strand: w
      • AT1G32230.1 - [+] show detail - WWE protein-protein interaction domain protein family
        Distance: -772; Region: promoter
      • AT1G32230.2 - [+] show detail - WWE protein-protein interaction domain protein family
        Distance: -772; Region: promoter
      • AT1G32230.3 - [+] show detail - WWE protein-protein interaction domain protein family
        Distance: -772; Region: promoter
    Flanking Genome Sequence: 11-1652-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TGCGCATAAT AGTCAATGAA CTATTGACTT GGAAAAGATA TCACCTTGGA
    TATTAAGTCT GGACTTTTTG CGTAGTTTTC TTATAAAAAA AACTATCAAA
    ATTAAATTTC TACAATTATT CATTGAAAAC ACAATCTTTG GAAAAGGCTA
    ATTTGAAAAC AATATTTGGA AATGGCTAAT TTGAGGATGG ATAAATAATA
    TTTCGATTGG CTTAAGAAAG AACACTAGAT CGATATCTCT TGGAGAGAGT
    TAGAAATCTT TTGATTTCTT TCAACTTTGT TTTTTGTTAA CAAACATTTG
    TTTTATAACG GGCCAATTTT TAGTTGATAA ATTGTACCTC GCAATTTTTT
    TCAACTTTGT TTTATAATGG CCCAATTTTT GTTTTGGGCT TTAGACAGCA
    TATTAAGATG GACCGGCCGT GACTACGGGT TTAGTTGGTA CCGAAATCGG
    CTGTCTTCCC AATCTTGTAA GATCCATAAA ATTCAAGACT AAACTTTTAT
    CATATACAAG TTTATACTAT TCGGTGGAAA ACCAAAGGAT CTATATATAC
    ATGCATGCAT GGGAATATTA TTCTGTGTAT GATATGTCAC AACTATATAG
    TTTGTGTAGC CATGGCTCAT ATTGAATAAT GAATATGTCA CAACTATATA
    GTNNTATATC TCTTATTTTN CTANAATTTA CCANCCNNCC NATTAGGCCT
    GTTTANATTC CG

AT1G32230.1

Model type
Protein coding
Short Description
WWE protein-protein interaction domain protein family
Curator Summary
Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.
Computational Description
RADICAL-INDUCED CELL DEATH1 (RCD1); CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 1 (TAIR:AT2G35510.1); Has 179 Blast hits to 178 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 168; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G32230.2

Model type
Protein coding
Short Description
WWE protein-protein interaction domain protein family
Curator Summary
Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.
Computational Description
RADICAL-INDUCED CELL DEATH1 (RCD1); CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 1 (TAIR:AT2G35510.1); Has 178 Blast hits to 176 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G32230.3

Model type
Protein coding
Short Description
WWE protein-protein interaction domain protein family
Curator Summary
Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.
Computational Description
WWE protein-protein interaction domain protein family; CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 1 (TAIR:AT2G35510.1); Has 178 Blast hits to 176 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR