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Mutant Lines
11-1653-1

11-1653-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 6277174 [Map]; Strand: c
  - AT1G18250.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
    Distance: 0; Region: exon3 (CDS)
  - AT1G18250.2 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
    Distance: 0; Region: exon3 (CDS)
Flanking Genome Sequence: 11-1653-1 - 5-prime edge
```
GTAGTAGCCT GTAAAAGTGC TTGCTCTGCC TTCAATTCAC CACAGTACTG 
TTGCACCGGC TTGTTCGGTA ACCCACAGTC TTGCAAACCA ACGGCTTACT 
CCAAAATCTT CAAAGTCGCT TGCCCAAAAG CT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 6277290 [Map]; Strand: c
- AT1G18250.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon3 (CDS)
- AT1G18250.2 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon3 (CDS)

GCTACTACAC GTTTCCCGTT ACGTGACCGG ACTTGTAAAC CAACCGGACA 
CATCTGGTTT AGATCGCTAA CACAACCGGC GTAGCTACAT TGACCTGAAC 
CTTTAACCGG CATAATCGAC ATGGCCAGGT TATAACTGTC ATTACAAAAT 
TAGTGAAAAA AGTAAGTTAA GTTTGTGTAA AAAAGAAAGC AGATTTGATG 
TAAGATTTAC AGACCCGTCG ACGAGGCTGA CGTCATAGAA GTCTAGCTCA 
GGGCCGAGAG TGATTTCGGC GAGAGTGGCC GGAGGTTCAC CGCCGGCACC 
GTTGCAGGAG AGAGAACCGC CGCAATCTCC GGTGGCGCAG TGACCACGGC 
CAGATCTGTC GAAGGTGCAG CCGTGGCGAC CCCAGAAACG GCCGGACCAG 
AGTGGTGGGA GTTGAAGAGA GTGGGCTTTG TTAGCTGGAA GCT

AT1G18250.1

Model type: Protein coding
Short Description: Pathogenesis-related thaumatin superfamily protein
Curator Summary: encodes a thaumatin-like protein
Computational Description: ATLP-1; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G73620.1); Has 1566 Blast hits to 1554 proteins in 172 species: Archae - 0; Bacteria - 23; Metazoa - 54; Fungi - 80; Plants - 1398; Viruses - 2; Other Eukaryotes - 9 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G18250.2

Model type: Protein coding
Short Description: Pathogenesis-related thaumatin superfamily protein
Curator Summary: encodes a thaumatin-like protein
Computational Description: ATLP-1; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G73620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR